| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_26590 |
|---|
| Symbol | |
|---|
| ID | 8396547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2933252 |
|---|
| End bp | 2934466 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644987401 |
|---|
| Product | argininosuccinate synthase |
|---|
| Protein accession | YP_003145007 |
|---|
| Protein GI | 257065335 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0137] Argininosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00032] argininosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.140459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAA AGAAAAAGGT CGTATTGGCG TACTCCGGCG GTCTGGACAC GTCCGTCGTT
TTGAAGTGGC TGCAGGTTGA GAAGAACCTC GACGTTATCG CCATCTGCGG AAACGTCGGT
CAGGACGACG AAGACCTGGA CTTCATCAAG CAGAAGGCCC TCGATATGGG CGCCATCGCC
GCCGACGCGG TCGACATGCG TGAAGAATAC GCCGACAAGT ACCTGACCAA GGCCCTGGCG
GCCAACGGTC TGTACGAGAA CAAGTACCCG CTGCTGTCCG CACTGTCCCG CCCGCTGCTG
TCCAAGTACA TGGTGGACGT GGCCCACAAG CACGGCGCCG ACTACATCGC CCACGGCTGC
ACCGGTAAGG GCAACGACCA GGTTCGTTTC GAAACCTCTA TCAAGGCCCT TGACCCGAAG
ATCGAGATTC TGGCTCCCGT GCGTGAGTGG GACCTGCTGA CCCGCGACGA CGAGATGGAT
TGGGCCGTCG CCCACGGCGT GCCGGTGCCC ACCACCAAGA AGAAGCCCTA CTCCGTCGAC
GACAACCTGT GGGGCCGTGC CATCGAATGC GGCGTTCTGG AAGATCCTTG GAACGAGCCG
CCCGAGGACA TCTGGACCAT CTCCAACAGC CCCGAGAACG CACCTGACGT TCCCGAATAT
GTCGAAATCA CCTTCAAGGA GGGCGTGCCC ACCGCTGTCA ACGGCGAGGA GATGAACTTC
CTGAGCGTCA TCAACAAGAT GAACGCCATC GCAGGCAACC ACGGCGTCGG CCGCCTGGAC
ATGATTGAAG ACCGCATGAT CGGTGTGAAG TCCCGCGAAT GCTACGAGAC CCCGGCCGCA
ACGGCCCTGA TCATCGCCCA TAAGGCCCTC GAGACCATGT GCCTCGAGCG CGAGACCCTC
TTCACCAAGC TCAACCTGGA GCACCAGTGG GCTCACGAGG TCTACTTCGG CAAGTGGTTC
TCGCCCCTCA AGCAGGCTCT GGATGCCTTC ATGGCCGAAA CCCAGCGTTT TGTGACCGGT
GTGGTGAAAA TCAAGTTCTA TAAGGGAAAT GCCACCGTGG TCGGCATGAA GAGCGACGTT
TCGCTGTATG ATTTCTGTCT GGCCAGCTAC GGCGCGGAGG ACACCTTCGA CCGTTCTGCC
GCCAAGGGCT TTATCGACCT GACCAGCCTT CCCATCAGCG TGTGGGCCGG CGTTCAGGGC
GCGAAAGTCG AGTAG
|
|---|
| Protein sequence | MSEKKKVVLA YSGGLDTSVV LKWLQVEKNL DVIAICGNVG QDDEDLDFIK QKALDMGAIA
ADAVDMREEY ADKYLTKALA ANGLYENKYP LLSALSRPLL SKYMVDVAHK HGADYIAHGC
TGKGNDQVRF ETSIKALDPK IEILAPVREW DLLTRDDEMD WAVAHGVPVP TTKKKPYSVD
DNLWGRAIEC GVLEDPWNEP PEDIWTISNS PENAPDVPEY VEITFKEGVP TAVNGEEMNF
LSVINKMNAI AGNHGVGRLD MIEDRMIGVK SRECYETPAA TALIIAHKAL ETMCLERETL
FTKLNLEHQW AHEVYFGKWF SPLKQALDAF MAETQRFVTG VVKIKFYKGN ATVVGMKSDV
SLYDFCLASY GAEDTFDRSA AKGFIDLTSL PISVWAGVQG AKVE
|
|---|
| |