Gene Shel_26380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26380 
Symbol 
ID8396526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2915310 
End bp2915720 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content58% 
IMG OID644987380 
Productrrf2 family protein, putative transcriptional regulator 
Protein accessionYP_003144989 
Protein GI257065317 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTTT CCACAAAAGG ACGTTACGCC CTGCGCTTTC TGTTGGACCT GGCGCAGCAT 
AAAGATGCGG GCGTCATTTC GCTTCAGGCG GTGGCGGAGC GGCAAAACGT GTCGAAAAAG
TACCTTGAGC GCATCGTGTC GCTGCTCAGC CCGTCGGGCA TCTTGAAGAT CACCCGCGGC
TATCAGGGCG GCTACCAGCT GGCGCGCGAT CCCGAGCTCA TAACCGTCGC TGAAATCCTC
ATGTTGACCG AAGGGGGGTT CTCTCCGGTC CCCATCGATG AGGCGCGGGA ATGCCCCGCA
TCCGCCTTTG CGTGGGAGAG TCTTGAGGGC GCCATCACCC GGTGCTTGGA GAACATCACG
TTGCAGGACA TTCTCGACCA TTCCGATCCA GTGATCGAGT ATTACATATA A
 
Protein sequence
MLVSTKGRYA LRFLLDLAQH KDAGVISLQA VAERQNVSKK YLERIVSLLS PSGILKITRG 
YQGGYQLARD PELITVAEIL MLTEGGFSPV PIDEARECPA SAFAWESLEG AITRCLENIT
LQDILDHSDP VIEYYI