| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_26350 |
|---|
| Symbol | |
|---|
| ID | 8396523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2909047 |
|---|
| End bp | 2911431 |
|---|
| Gene Length | 2385 bp |
|---|
| Protein Length | 794 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644987377 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003144986 |
|---|
| Protein GI | 257065314 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00144555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTGTC CGAAGTGCGG AAACCAATTG AACCAAGACG ATGCGTTCTG CGGAAGCTGC
GGTGCCCCCG TGGCGGATCG AGCGGATGCC TTGCAGAAAG CGATGCCGCA ACCCGAGGCA
CCTGCGGCGC AGCCGCCCAC CCAGGCCCCG AAAAAGCGGG TCGGTGCCGG TATGGTCGCC
CTTGCGGCCG TGCTCCTGTG CGGGCTTGTG GCCATAGGCG CCACCATTGC GGTGCTCCAT
GGGGACGATG CCGATGAGTC AACGGCCACG ACGTCCCAGA CTGCCGGCCA GACCTCTACG
GCGACAGCGG CCGACGGCCA AGAGGTCGTC AGCATGGAAC GCCCCGTTCT TATCTCCTTC
ACCCAGGAAA GCGACGCTGC GTCCGTGGTG CCGAGTGTTG AACCGTACGC CGTCGAAGAC
GGCCTGACCA ACGTGGTCAA CGCCAACAGG TTCTACTTGA CGGACGAGGA GCAGGATCTG
GTGGTCCAAA ACGGGTTCGC CGTGTCGGTG GGCCAGGCAG GATACGAATT CTTCGACTCC
TACGAAATGA ACCGCTACAG CCAGACGCCG AATTTCGTAA CCGTCGATTC GATGATGCAT
ACCTACCATC TGTATTTCAG CTACCTCATG AAGAACACCG AGCGCGATTA CCTGGCGCCC
GCCTTAGGCG AGGTGAGCCG GGCCATGCTC GACGAAAGTC TGGAGCAGCT TGCGGCGGCC
GAAGGCACCG GGTGGGAGGA CGCCGCCCTG CGCAATGTGG CGTTCTTCGC GGTGGGCGCG
AGCCTGCTCG ATCCCTCGAC CGAGGTGCCG TCCCAGGTGG AGGATGTGGT TTCCGCCGAA
CTGGCGCAGA TTGAAGACGC CGCCGGCATC GCCGAATCCC CGCTGATGGG CGCCGGCAAC
ATGGAAGATT ACAGCCAATA CGTCGTACGG GGCTACTACG AGGGCGACGA GCAGCTGGAA
AGCTACTTCA AGGCCATGAT GTGGTACGGC CGCATGAACT TCGCTCAGAA AAACGAGGAC
CTGGATAGGA GCGCCTGTCT GATGGCGCTG GCGCTGCAGG AAAGCGGCGC TCTGGCGGAT
TGGGAAGGCA TCTACACCGT GACCAGCTTT TTCGCAGGCG CCAGCGACGA CTGCGGCTTC
TACGAGTACT ATCCCATCCT CGAGTCGGTT TACGGCAAAA CTCCCTCCAT TGACGATCTG
GTCGAAAACG AGGATGCGTG GGCCGAGGTC CACACTCTGA CGGCGGACAT GCCTGCGCCC
CAGATCAACT CCATCGCCAC AGGGCGCGAC GACGACGCCG ACTACGAGGA GGAGAACAAG
GGTTACCGCT TTATGGGGCA GAGGTTCACG CTGGACTCGG CCATCTTCCA GAAGCTGGTC
TACAACGAGG TGCTTGCGAA CGACGCCGGC GAGGACCGCA TGCTGCCCTG CGCTCTTGAT
GTGCCGGCGG CCTTGGGGTC CGACGAAGCT CTCGAAATCC TCGAGGAGCA GGGCGAAACC
GGTTACGAGA ACTACTCCGA GAACATGACC GCCCTGCGTG AGGGCCTGGG CAGCGCCGAC
GACGACACGC TGTGGTCGGC CAGCCTGTAC AGCCAGTGGC TCTATACGCT GGATCCGCTG
CTGGACGTGA AGGGCGAAGG CTATCCGTCC TTTATGGCCA ACGACCAGTG GACCCGCAAG
AACCTGCAGT CCTACCTGGG AAGCTACTCC GAGCTCAAGC ACGACACCAT TCTGTATTCC
AAACAGGTCA TGGCCGAGAT GGGCGGCGGC GAAGAGCCCG ATGTGGACGA CCGCGGCTAC
GTGGAGCCGG AGCCGATGGT GTTCGAGCGT CTGCAGAAGC TGACGGACGC CACGGCGGAA
GGGCTCGACC GTTACGGCAT GCTGAGCGCC GAGGACGCCG AAAACCTGGA GAAGCTTTCC
TCGTTGGCAG GCCAGCTTGA AACCATCGCC ATCAAGGAGC TGCAGGGCGA ACTGCCCACG
GACGAGGAGT TCGAACTCAT CCGCAGCTAC GGCGGCCAGC TTGAGCATTT CTGGCAGACG
GTGTACGAAG GCGAAGCTGA GGGCGAGAAT TTCACGGCGC GCGAATTCCC GGCGGCATTG
GTGGCCGACA TCGCCACGGA TGCGCAGTCG GGCACCTGCC TCGAGGTGGG CGTGGGCGAC
CTTTCAGAAG TGTTCGTAGT GGTGCCCATC GACGGCGAAC TGCATCTGAC CAGCGGCGTT
GTATTCAGCT ATTACGAGTT CGAGCAGCCT ATCGCCGAGC GTCTGACCGA TTCCGAATGG
CGCAAGATGA TGGGAATCGA TATCGGCGAC GACGGCAACT TCGCCAAGCC GGCCCAGGAC
ATTGAGGAAT GGACCCGCGG ATTCCAGGTC GAGCGACCCC GGTAG
|
|---|
| Protein sequence | MFCPKCGNQL NQDDAFCGSC GAPVADRADA LQKAMPQPEA PAAQPPTQAP KKRVGAGMVA
LAAVLLCGLV AIGATIAVLH GDDADESTAT TSQTAGQTST ATAADGQEVV SMERPVLISF
TQESDAASVV PSVEPYAVED GLTNVVNANR FYLTDEEQDL VVQNGFAVSV GQAGYEFFDS
YEMNRYSQTP NFVTVDSMMH TYHLYFSYLM KNTERDYLAP ALGEVSRAML DESLEQLAAA
EGTGWEDAAL RNVAFFAVGA SLLDPSTEVP SQVEDVVSAE LAQIEDAAGI AESPLMGAGN
MEDYSQYVVR GYYEGDEQLE SYFKAMMWYG RMNFAQKNED LDRSACLMAL ALQESGALAD
WEGIYTVTSF FAGASDDCGF YEYYPILESV YGKTPSIDDL VENEDAWAEV HTLTADMPAP
QINSIATGRD DDADYEEENK GYRFMGQRFT LDSAIFQKLV YNEVLANDAG EDRMLPCALD
VPAALGSDEA LEILEEQGET GYENYSENMT ALREGLGSAD DDTLWSASLY SQWLYTLDPL
LDVKGEGYPS FMANDQWTRK NLQSYLGSYS ELKHDTILYS KQVMAEMGGG EEPDVDDRGY
VEPEPMVFER LQKLTDATAE GLDRYGMLSA EDAENLEKLS SLAGQLETIA IKELQGELPT
DEEFELIRSY GGQLEHFWQT VYEGEAEGEN FTAREFPAAL VADIATDAQS GTCLEVGVGD
LSEVFVVVPI DGELHLTSGV VFSYYEFEQP IAERLTDSEW RKMMGIDIGD DGNFAKPAQD
IEEWTRGFQV ERPR
|
|---|
| |