Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_26220 |
Symbol | |
ID | 8396510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2895346 |
End bp | 2897319 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644987364 |
Product | predicted SAM-dependent methyltransferase |
Protein accession | YP_003144974 |
Protein GI | 257065302 |
COG category | [R] General function prediction only |
COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACCAGG AGAATCGTAG CAACGACAGG CCGAACGGCG GGTCAAGGGG TCGTTCCGGC GGCTACCGCG ATGGGCGCTC CGGCGGATAC CGCGGCAAGT CCGACGGCGA CCGCAGGCGT TCGGGCGACG GTCGAGGCGG CTATCGCGGA GGCCGAGACG GAGAGTCCCG CGGAGGTTAC AAAGGCAGCC GCGACGGGGG TCCCCGCGGC GGCTACAAGG GCGGCCGCGA CGGAGATTCC CGCGGTGGGT ATCGCAGCGG CAAGCCCGGC GACAATCGGG GCGGTCGTTC CGGCGGCTAC CGCGGCAGGT CCGACGGCGA GTCCCGCAGT GGCTACAAGG GCAAGCGCGA CGGCGGCTAC AGGAGCGACG GCAACGACCG CGGAGGCTTC CGCAGCGAGC GCGACGGGAA CCGCAACGAC CGTAACTACC AGGGCAAACG CGACGGCTAC AAGGGTTCCC GCGATGGGGA GTCCAGAGGC TATCGCGCCA ATCGCAGCGA CCGCGGTGAC CGTGGCGGCT TCCGCAACGA CCGTAACGAC CGTCGTGACT ACAAGGGCAA GCGCGACGAC TTCAGGGGTG GCCGTCCCGA CCGCGACGAC CGCGGCTACC GCGGCAAGCC GGCCGAGCAG GAGAAGCCTG AGCGCGAATA CACGGGCTAC CACGGCCAGC TGGAGCGTCG CAACGACCGC GGCGGTTTCC GCGGAGGACG TCCTGGCGGC GACCGCGGCG GTTTCCGTGG CAAGCCCGGC GACCGCGGCG GAGCCCGCGA CAGGCAGGGC GCCTACCGCA GCGGCAAATC CGTGTCCGCA CGCGGGAACT TCCGCGATGC CGCACCTGCG CCCGAGCCGA TTGACCTGGG CGAACCCGAG AATATCATCC TTGTGGCCAA CGCCATGACG GGCACCGAGG AACAGATTGC CGTATACGAC GGCGGTGCCG ACCAGTTCGC CGCGCGCCTG AAGAAGGTGG CCAAGGAGCG TCGCAAGTGG GCCGAGGACA ACCAGATCTG CTGCTACCGC GTGTACGACG CCGACCTGCC CGATTTCTCC GTGGCCATCG ACCGCTACGA CGGCGTTTGG AAGAACGAAG GCGAAAGCTA CCTGGTCATT GCCGAGTATC AGGCTCCTAA GGAGGTCAGC GAGGAGAAGG CGGCGGCCCG GTTCGCCGAC GTCATGACGC TGGCTCCCGT GGTGATGGGC GTGCCTGCGG ACCACGTGTT CGCCAAGACG CGCCGCCACG AGAAGGGCGG CGGTCAGTAT ACCGACCAGC AAAAGGACAG CTGTGTGGTC TATACCGACG AAAGCGGCTG CATTTTCGAA GTTGACCTGG GCGGATATCT GGATACAGGC ATCTTTTTGG ACCATCGCAT CACCCGCGAG CTGGTGGGCC GACTGGCGCA GGGCACCAAC TTCCTGAACC TGTTCGCTTA CACCGGCACC GCCACGGTGC ATGCGGCTTT GGGTGGCGCC CTCACCACGA CCACCGTGGA CATGTCCCGC ACGTATCTGG GCTGGGCCGA GCGCAATATG GAGCTGAACA ACATCAGCGA CCCCACCCGC CATCGTTTCG TGAGGTACGA CGCACTGCGT TGGATCGAGC GCGAAATCGG CACGGGGAAC CGCTACGACC TGATTTTCGT GGACCCGCCC ACGTTCTCCA ATTCGAAGTC CATGGGCGAC ACCACCTGGA GCGTGCAGCG CGATCACGTG AATCTGCTGA TCGGCGTGGC GGCTCTGCTC ACCCCCGGCG GCAAGGCGAT CTTCAGTTGC AACCTGCGCA ACTTCACGCC GGATGTGGAG GCGCTGGCCA AAGAGGGCAT CGTGCTGAAG GACATCACGG CGCAGACCAT CCCGCACGAC TTCGAGCGTA ATCCGCGCAT CCATAAATGC TACGTGGTGA GTAAGGTTCT GCCGCAACAG GCCGAGCCTC AGGAAGTCGA GGCGCAGGCC GACCCGGAGG AACAGGCCGA ATAA
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Protein sequence | MDQENRSNDR PNGGSRGRSG GYRDGRSGGY RGKSDGDRRR SGDGRGGYRG GRDGESRGGY KGSRDGGPRG GYKGGRDGDS RGGYRSGKPG DNRGGRSGGY RGRSDGESRS GYKGKRDGGY RSDGNDRGGF RSERDGNRND RNYQGKRDGY KGSRDGESRG YRANRSDRGD RGGFRNDRND RRDYKGKRDD FRGGRPDRDD RGYRGKPAEQ EKPEREYTGY HGQLERRNDR GGFRGGRPGG DRGGFRGKPG DRGGARDRQG AYRSGKSVSA RGNFRDAAPA PEPIDLGEPE NIILVANAMT GTEEQIAVYD GGADQFAARL KKVAKERRKW AEDNQICCYR VYDADLPDFS VAIDRYDGVW KNEGESYLVI AEYQAPKEVS EEKAAARFAD VMTLAPVVMG VPADHVFAKT RRHEKGGGQY TDQQKDSCVV YTDESGCIFE VDLGGYLDTG IFLDHRITRE LVGRLAQGTN FLNLFAYTGT ATVHAALGGA LTTTTVDMSR TYLGWAERNM ELNNISDPTR HRFVRYDALR WIEREIGTGN RYDLIFVDPP TFSNSKSMGD TTWSVQRDHV NLLIGVAALL TPGGKAIFSC NLRNFTPDVE ALAKEGIVLK DITAQTIPHD FERNPRIHKC YVVSKVLPQQ AEPQEVEAQA DPEEQAE
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