Gene Shel_26190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26190 
Symbol 
ID8396507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2890126 
End bp2891115 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content63% 
IMG OID644987361 
Productpredicted GTPase, G3E family 
Protein accessionYP_003144971 
Protein GI257065299 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCAA ACGAAACCCT TCCCGTAAAA ATCGACATCA TCGGCGGCTA TCTGGGCGCC 
GGTAAAACCA CCTTCCTGAA CAAGCTCGTC CGCGACGGGT TGGGCGCCTC GCGCGTCGCC
ATCGTCGAGA ACGAGTTCGG ACAGGAGCCT GTGGACGATG CCGTGATCGA AAGCCCCGGG
TTCTCGATGC GCACGCTGGC GTCGGGTTGC ATTTGCTGCT CGCTGAAGGT GGGGTTCATG
GACTGCATCG CCGATATCGT CGCCGAGTGC CAGCCTGACC GCATCCTCAT CGAACCTACG
GGGCTTGCCA GCCCTGCCGA ACTGGAGCGG ACCTGTCAGC TGGCCATGCG CATGAAGGGA
CTTGCCCGTC CCGTGCGCGT GAACTCCATG ACCGCCATCG TCGATGCCAC CGACGCCGTC
GAAATGATCG ATTTCGAAAT CCCCGTCTAC ATGAGCCAAA TCGAACAGGC CCACCTGATC
GTGCTGAGCC ACACCCAAGA GTTGGATGCC GCGCAGCTTA ACGAGGCGGT AGCGGCGATT
CGCGAACACG CCAAGCCGCA GGTGCGCATC ATAACCGAGC CCTGGGACAG CCTCGATGCG
CTTGAGGTGC TGGCCCTTTC GGAACAGGCC TACGCAGACG ACCTTGACCA TGCGGAAGAC
GCCGACGACC ATGATCACGA CCGCGCCCAT GACCACGGGC ACGGGCACCA CCACAGCCAC
GAAGGCTTCT CTTCCATAGT CCTGAAGCCC CAAGGCGCCT TCGACAGCCA AACCGTCGAA
CGGCTGAACA CCGCCCTGCG CGAACAGGGA ACATCCCGGG CGAAGGGCTT TCTGCCCTCC
CCCGACGGCG GACTGCTCCA TTTCGAATAC GTGAACGGAC GCAGCACGGC CGAACCGACC
CATTACGAAG GCCCCGCCAA GCTCATCGTC ATCGGCGCGC ACGTCGATGC TGCGGCCCTT
GCCTTCGTTG AGGACGCTTC CCGGCTCTAG
 
Protein sequence
MDSNETLPVK IDIIGGYLGA GKTTFLNKLV RDGLGASRVA IVENEFGQEP VDDAVIESPG 
FSMRTLASGC ICCSLKVGFM DCIADIVAEC QPDRILIEPT GLASPAELER TCQLAMRMKG
LARPVRVNSM TAIVDATDAV EMIDFEIPVY MSQIEQAHLI VLSHTQELDA AQLNEAVAAI
REHAKPQVRI ITEPWDSLDA LEVLALSEQA YADDLDHAED ADDHDHDRAH DHGHGHHHSH
EGFSSIVLKP QGAFDSQTVE RLNTALREQG TSRAKGFLPS PDGGLLHFEY VNGRSTAEPT
HYEGPAKLIV IGAHVDAAAL AFVEDASRL