| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_26170 |
|---|
| Symbol | |
|---|
| ID | 8396505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2886691 |
|---|
| End bp | 2888511 |
|---|
| Gene Length | 1821 bp |
|---|
| Protein Length | 606 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644987359 |
|---|
| Product | uncharacterized metal-binding protein |
|---|
| Protein accession | YP_003144969 |
|---|
| Protein GI | 257065297 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3894] Uncharacterized metal-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.911751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCACGA TCAGCGTCGA CTCGGGCTCG GTCAAGATCG AGTGCAAACC CGGGCAGTCC
CTGCTCGATG CGCTGCTTGA CGCAAATGTT GCGGTGGACA ACCCCTGCAA CGGCAAAGGG
ACGTGCGGCA AGTGCCGCGT GAAGGTTGTT TCGGAAAACC CCGTCGCTCC GACGGAAACC
GAGCGCCGAC TGCTTTCCGC CAAGGAGATC GAAGCGGGCG TAAGGCTCGC CTGCATGGTG
AAGCCCGAAA CCGACATGGA CATCGTATCG ATGCACCGGG AACGCAAGCA TGAAGTGCTC
ACGACCGGCT TGCTGCCTGA ATTCGAATAC GACCCTGACA TATCGAAGCG GACGTTTACC
ATCGAACGTC CGACGCTGGA AGACCAGACC CCCTTCGAAG ACCAGGCCTG CGCCCAGCTG
GGTGTGGACG CGCTTTCTGC GGAGGTGCTG ATTGACGCCG GCCTCGTACC CGGCGAGTTC
ACGGCGGTGT TTCACGATGG CGAAGTCGTG CAGATCGAGC GGGGCGACAC CACCGACGAG
CTGTACGGCG TGGCCATCGA CATCGGCACC ACCACCGTGG TGTGCGAGCT GGTCAACCTT
GCCACGGGCG AAGTTCTGGC GGACGCTTCG CAGATCAACG CCCAGAAGGT CTTCGGCCTG
GACGTGCTCA CGCGCATCAC GTACGAGCTT GAGCATCCGG ACAACGGCAT CGCCAACCTG
CGCAAGGTGA TGGTGAAGTC CATCAACGGC ATGTTCGACG AGCTTTGCGA AGAGACCGGC
ATCCCTCGCA ACCGGATTTA CGAGATAGCC GTGGGCGCGA ACTGCACGAT GATGCACATG
CTGTTGGGCG TGGATGCCCA CGGCATCGGC AAGGCCCCCT TCGCCCCCGC CTTCGCACGC
GCGAAGGACC TGCCTGCCCG CGCCATCGGC ATCGAGGCGG CCCCCGGCGC GCGCCTGTAC
TGCCTCCCGC ACGTTTCGGC CTACATCGGC GCCGACATCG TGGCGGGCGC CTACGTGTGC
GACCTGCACA ACGTCAAGAA CAACGTGCTG TTCATAGACA TCGGCACGAA CGGCGAAATC
GTCCTTTCAA AACAGGGGCA GCTGCTGTCG TGCTCGTGTG CGGCCGGCCC CGCCCTTGAA
GGCATGAACA TCAGCGCCGG CATGCGTGCG GCCGAAGGCG CCATCGAAGA GATCACCATT
ACCGAAGATG GCAACCAGTT CGCGATCATC GGCGGCGACG TGGAGCCTCA GGGTTTGTGC
GGCAGCGGCA TCTTGGCCGT GCTGCGTGAG CTCGTCCGCT GCGGTTTCGT GCGCAAGAAC
GGTGCGTTCG TGAAGCTGGA CCGCCTGCCC GAGGACGATT ACCGCAGGAA GATGCTCATC
GAACACGAGG ACGGCAAGCG CTCGTTCGTG CTGGTCGACG GGGCGGAGCC CATGCTTGTG
ACCCAAGGCG ACGTGCGGCA GGTGCAGCTT GCCAAGGGCG CCATCCTTTC GGGATTCATG
GCGCTTCTGA ACAAGGCTGG CATCGGTATG GACGATCTGG ATCAGGTTAT CATCGCAGGT
CAGTTCGGCG CGCATCTCAC GGCCAGTTCC ATCACCGGCA CGGGAATCCT TCCCGAAGAG
GTGGAGGACC GCATCGTCTA CGCCGGCAAC ACCTCCAAGA CGGGCGCGTA CATGGCGCTC
ATGTCGGGCG AGGTCAAGCG CGGGATGGAG CGGCTTGCCC ACGAGATGGA CTACATGGAG
CTGGGGGCGA CGGAGAACTA CGAGCGTCTG TTCTCCCAGT GCATGATGTT CCCGGACGTT
TCCAAACGGA AAGAAGGCTA A
|
|---|
| Protein sequence | MPTISVDSGS VKIECKPGQS LLDALLDANV AVDNPCNGKG TCGKCRVKVV SENPVAPTET
ERRLLSAKEI EAGVRLACMV KPETDMDIVS MHRERKHEVL TTGLLPEFEY DPDISKRTFT
IERPTLEDQT PFEDQACAQL GVDALSAEVL IDAGLVPGEF TAVFHDGEVV QIERGDTTDE
LYGVAIDIGT TTVVCELVNL ATGEVLADAS QINAQKVFGL DVLTRITYEL EHPDNGIANL
RKVMVKSING MFDELCEETG IPRNRIYEIA VGANCTMMHM LLGVDAHGIG KAPFAPAFAR
AKDLPARAIG IEAAPGARLY CLPHVSAYIG ADIVAGAYVC DLHNVKNNVL FIDIGTNGEI
VLSKQGQLLS CSCAAGPALE GMNISAGMRA AEGAIEEITI TEDGNQFAII GGDVEPQGLC
GSGILAVLRE LVRCGFVRKN GAFVKLDRLP EDDYRRKMLI EHEDGKRSFV LVDGAEPMLV
TQGDVRQVQL AKGAILSGFM ALLNKAGIGM DDLDQVIIAG QFGAHLTASS ITGTGILPEE
VEDRIVYAGN TSKTGAYMAL MSGEVKRGME RLAHEMDYME LGATENYERL FSQCMMFPDV
SKRKEG
|
|---|
| |