Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_26050 |
Symbol | |
ID | 8396493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2873843 |
End bp | 2874475 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644987348 |
Product | putative NADH-flavin reductase |
Protein accession | YP_003144959 |
Protein GI | 257065287 |
COG category | [R] General function prediction only |
COG ID | [COG2910] Putative NADH-flavin reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.600707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGA TTGCAGTCGT AGCGGCAAAC GGCAAGGCCG GCAAGCTCAT CGTGAAGGAG GCAATCGATC GCGGCATGGA CGTCACCGCC TTCGTGCGCG GCGAGAACCA GACCGTCGCC GAGAAAGCCG TCGTGAGGGA CATCATGGAC CTCACGGCCG AGGACCTGGC GGGCTTCGAC GTCGTGGTCG ACGCCTTCGG CGCCTGGACG CCCGAGACGC TGCCCCAGCA CTCCACCACG CTCGCGCACC TCTGCGACTG CGTTGCCGGC ACCGACGTGC GCCTGCTCGT CGTGGGCGGT GCGGGCTCGC TCTACGTGAA CCCCGAGCAC ACCGCCTGCG TGGCCGACGG CCCCGACTTC CCGGACGCCT TCAAACCGCT GGCGGCGGCC ATGGCCAAGG CCCTGGAGGA GCTGCGCGCC CGCGACGACG TGGCGTGGAC CTACATCTCT CCTGCGGGCG ACTTCCAGGC CGAGGGCGAG CGCACCGGCG CCTACATCCT GGGCGGCGAG GAGCTCACGC TCAACGAGGC TGGCGAGTCC GTCATCAGCT ACGCCGACTA TGCCATCGCC ATGGTCGACG AGATCGAGTC CGGAGACCAC ATCCGCCAGC GCATCAGCGT GGTGCGCAAG TAG
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Protein sequence | MKKIAVVAAN GKAGKLIVKE AIDRGMDVTA FVRGENQTVA EKAVVRDIMD LTAEDLAGFD VVVDAFGAWT PETLPQHSTT LAHLCDCVAG TDVRLLVVGG AGSLYVNPEH TACVADGPDF PDAFKPLAAA MAKALEELRA RDDVAWTYIS PAGDFQAEGE RTGAYILGGE ELTLNEAGES VISYADYAIA MVDEIESGDH IRQRISVVRK
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