Gene Shel_26050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26050 
Symbol 
ID8396493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2873843 
End bp2874475 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content68% 
IMG OID644987348 
Productputative NADH-flavin reductase 
Protein accessionYP_003144959 
Protein GI257065287 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.600707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TTGCAGTCGT AGCGGCAAAC GGCAAGGCCG GCAAGCTCAT CGTGAAGGAG 
GCAATCGATC GCGGCATGGA CGTCACCGCC TTCGTGCGCG GCGAGAACCA GACCGTCGCC
GAGAAAGCCG TCGTGAGGGA CATCATGGAC CTCACGGCCG AGGACCTGGC GGGCTTCGAC
GTCGTGGTCG ACGCCTTCGG CGCCTGGACG CCCGAGACGC TGCCCCAGCA CTCCACCACG
CTCGCGCACC TCTGCGACTG CGTTGCCGGC ACCGACGTGC GCCTGCTCGT CGTGGGCGGT
GCGGGCTCGC TCTACGTGAA CCCCGAGCAC ACCGCCTGCG TGGCCGACGG CCCCGACTTC
CCGGACGCCT TCAAACCGCT GGCGGCGGCC ATGGCCAAGG CCCTGGAGGA GCTGCGCGCC
CGCGACGACG TGGCGTGGAC CTACATCTCT CCTGCGGGCG ACTTCCAGGC CGAGGGCGAG
CGCACCGGCG CCTACATCCT GGGCGGCGAG GAGCTCACGC TCAACGAGGC TGGCGAGTCC
GTCATCAGCT ACGCCGACTA TGCCATCGCC ATGGTCGACG AGATCGAGTC CGGAGACCAC
ATCCGCCAGC GCATCAGCGT GGTGCGCAAG TAG
 
Protein sequence
MKKIAVVAAN GKAGKLIVKE AIDRGMDVTA FVRGENQTVA EKAVVRDIMD LTAEDLAGFD 
VVVDAFGAWT PETLPQHSTT LAHLCDCVAG TDVRLLVVGG AGSLYVNPEH TACVADGPDF
PDAFKPLAAA MAKALEELRA RDDVAWTYIS PAGDFQAEGE RTGAYILGGE ELTLNEAGES
VISYADYAIA MVDEIESGDH IRQRISVVRK