Gene Shel_26020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26020 
Symbol 
ID8396490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2870986 
End bp2871588 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content65% 
IMG OID644987345 
Productpredicted transcriptional regulator 
Protein accessionYP_003144956 
Protein GI257065284 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.676624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTCG GCGAGAAACT GCAGGAGCTA AGGAAGGCGC GCTCGCTCAC GCAGGAGCAG 
CTGGCAGAGG CGCTCTACGT CTCGAGGACG GCCGTGTCCA AGTGGGAGTC CGGCAGGGGC
TACCCGAGCA TCGATTCGCT CAAGGAGGTG TCGCGCTTTT TCTCGGTGAC GATAGACGAG
CTTATAAGCC CTGACGAGGT CGTGTCGGTC GCACAGGCCG AAAGGAGGTC CTTCGCACGC
GGGTATGCGT CGATGGTGTG CGGGCTGTTG GACGTTTTGG TTGCGCTGCT CCTGGTTGTG
CCGGTGTTCG GCAACGGCCC CGAGGGTCCG GCTGCGGTCA GCCTGCTCGC GCTAACCGGC
GCCAGCACAT GGATCAAAGT GGTCTTTACC GCATGCGTCG GGGCGACTGT GATTTGCGGG
CTCTGCGAGA TCGCCGCATC CCGCGCCGAC GGACGATGGG GGAAGCTGGC CCTGGCGGCG
GGGGCCGCGC TTTCCGCTGC CTGCGTGGCC GTCTTCATCC TGGCGAGGCA GCCTTACGCT
GGCATCATTT GCTTCGCGCT GCTCGCGGCG AAGGCAGTTA TGCTCTGGAT GCGCGACCGC
TAG
 
Protein sequence
MEFGEKLQEL RKARSLTQEQ LAEALYVSRT AVSKWESGRG YPSIDSLKEV SRFFSVTIDE 
LISPDEVVSV AQAERRSFAR GYASMVCGLL DVLVALLLVV PVFGNGPEGP AAVSLLALTG
ASTWIKVVFT ACVGATVICG LCEIAASRAD GRWGKLALAA GAALSAACVA VFILARQPYA
GIICFALLAA KAVMLWMRDR