Gene Shel_25890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25890 
Symbol 
ID8396477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2861536 
End bp2862354 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content63% 
IMG OID644987332 
Productpredicted transcriptional regulator 
Protein accessionYP_003144943 
Protein GI257065271 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCA GCGAGGCCAT CCAGAACGCC CGCAAGGAAG CGGGACTCAC GCAGGAGCAG 
CTTGCGGCAA AGGTGTACGT GACGCGGCAG GCCGTCAGCC GCTGGGAGAC CGGGGAAAGC
GAGCCGAGCA TCGATATGCG CAAGCTCTTG GCAAGCGTCT TGGGCGTGCC CGCAGTGGGC
CTGTTCGACC TGCCCGACGC TCCCGCGTGC CAGTGCTGCG GCACCCCGTT CGACGTGCCG
AACATGCCCT TCGGCACCAA CGCGGACGGC ACGGAAAACC CCGACTACTG CGGCTGGTGT
TACCAGAACG GCGAGTTCAC CGCGGCGGGG CTGGACGAGA CCATCGAGCG CAACGTGCCC
TTCCTGATGC AGGCCACCGG CTACACCCAG GAAGAGGCCG TGTCGTTTTT GGGCGCGGTC
ATGCCTACAC TGAAACACTG GCGCGACGTT CAGAACAGTA ACGTGGCGGC CAACCTGCGC
AGGAGCAAAC TGTACGTATG TCCCGATTGC GGAAACGTCG TATGGTCTGC GGGCGAGGTC
GCGGTTCGCT GCTGCAGCAA CGTGCTCGAG CCGCTTGCTC CCGTGGAAAA CGACGGCGTG
CTGGACGCTA CGGTGGAACA TGCCGACGGA GTTCAGCGCG TGCGCATTAT CCACCCCATG
GCGAAGGACG ACCATTTGAT GTTCATCGCA GCAGTGGGCG ATGACCTGGT GCGCATCAAG
CGCCTGTACC CCGAGCAGGA GGCGCGAGCG GAGTTCCCGC TGCAGGGTCG CTGCAAGATT
TACGCATTCG GTAAGAGCTG CGGTTTGATC GAGCTTTAG
 
Protein sequence
MKVSEAIQNA RKEAGLTQEQ LAAKVYVTRQ AVSRWETGES EPSIDMRKLL ASVLGVPAVG 
LFDLPDAPAC QCCGTPFDVP NMPFGTNADG TENPDYCGWC YQNGEFTAAG LDETIERNVP
FLMQATGYTQ EEAVSFLGAV MPTLKHWRDV QNSNVAANLR RSKLYVCPDC GNVVWSAGEV
AVRCCSNVLE PLAPVENDGV LDATVEHADG VQRVRIIHPM AKDDHLMFIA AVGDDLVRIK
RLYPEQEARA EFPLQGRCKI YAFGKSCGLI EL