Gene Shel_25880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25880 
Symbol 
ID8396476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2860836 
End bp2861468 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content63% 
IMG OID644987331 
Producthypothetical protein 
Protein accessionYP_003144942 
Protein GI257065270 
COG category[S] Function unknown 
COG ID[COG4832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTCG ACTTCAAGAA GGAATACCGC GACCTGTATC GGCCGAAAAC CACGCCGTCT 
GTGGTGCAGG TGCCGCCCAT GTGCTTTTTA GCCGTGGAGG GCGAAGGCGA TCCCAACCAG
CAGGACGGGG CCTACCAGCA CGCTTTGAGT CTGCTGTACG CCGTCGCCTA CACGCTGAAG
ATGAGCTACA AGACCGACTA CGCGATCGAC GGGTTTTACG AGTACGTTGT GCCGCCGTTG
GAGGGCTTTT GGTGGCAGCC GGGCGTTGCG GGCGTGGACC CCACGGACAA GGCCTCGTTT
CGGTGGCTTT CCGTCATCCG CGTACCCGAA TTCATCACCG AGGCCGACTT CACCTGGGCA
AAGGCCGAGG CGCAGCGGAA AAAGAAACTC GACTGCTCGC CCGTGCAGCT GATTGAAATC
GACGAGGGCC TGTGCGTGCA ATGCATGCAT GTGGGCCCTT ACGACGACGA GCCCGCAACG
GCCGAGGCCA TGCACCGGTT CGCAGCCGAA GCAGGCTACG TGCCCGATTT CACCGACGCG
CGCCGGCACC ACGAGATCTA TCTGTCCGAC CCCCGCAAGG CCGACCCCGC CAAGATGAAA
ACCGTCGTCC GCCACCCCGT CCGCCCGGTC TAG
 
Protein sequence
MAFDFKKEYR DLYRPKTTPS VVQVPPMCFL AVEGEGDPNQ QDGAYQHALS LLYAVAYTLK 
MSYKTDYAID GFYEYVVPPL EGFWWQPGVA GVDPTDKASF RWLSVIRVPE FITEADFTWA
KAEAQRKKKL DCSPVQLIEI DEGLCVQCMH VGPYDDEPAT AEAMHRFAAE AGYVPDFTDA
RRHHEIYLSD PRKADPAKMK TVVRHPVRPV