Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_25880 |
Symbol | |
ID | 8396476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2860836 |
End bp | 2861468 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644987331 |
Product | hypothetical protein |
Protein accession | YP_003144942 |
Protein GI | 257065270 |
COG category | [S] Function unknown |
COG ID | [COG4832] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTCG ACTTCAAGAA GGAATACCGC GACCTGTATC GGCCGAAAAC CACGCCGTCT GTGGTGCAGG TGCCGCCCAT GTGCTTTTTA GCCGTGGAGG GCGAAGGCGA TCCCAACCAG CAGGACGGGG CCTACCAGCA CGCTTTGAGT CTGCTGTACG CCGTCGCCTA CACGCTGAAG ATGAGCTACA AGACCGACTA CGCGATCGAC GGGTTTTACG AGTACGTTGT GCCGCCGTTG GAGGGCTTTT GGTGGCAGCC GGGCGTTGCG GGCGTGGACC CCACGGACAA GGCCTCGTTT CGGTGGCTTT CCGTCATCCG CGTACCCGAA TTCATCACCG AGGCCGACTT CACCTGGGCA AAGGCCGAGG CGCAGCGGAA AAAGAAACTC GACTGCTCGC CCGTGCAGCT GATTGAAATC GACGAGGGCC TGTGCGTGCA ATGCATGCAT GTGGGCCCTT ACGACGACGA GCCCGCAACG GCCGAGGCCA TGCACCGGTT CGCAGCCGAA GCAGGCTACG TGCCCGATTT CACCGACGCG CGCCGGCACC ACGAGATCTA TCTGTCCGAC CCCCGCAAGG CCGACCCCGC CAAGATGAAA ACCGTCGTCC GCCACCCCGT CCGCCCGGTC TAG
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Protein sequence | MAFDFKKEYR DLYRPKTTPS VVQVPPMCFL AVEGEGDPNQ QDGAYQHALS LLYAVAYTLK MSYKTDYAID GFYEYVVPPL EGFWWQPGVA GVDPTDKASF RWLSVIRVPE FITEADFTWA KAEAQRKKKL DCSPVQLIEI DEGLCVQCMH VGPYDDEPAT AEAMHRFAAE AGYVPDFTDA RRHHEIYLSD PRKADPAKMK TVVRHPVRPV
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