| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_25850 |
|---|
| Symbol | |
|---|
| ID | 8396473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 2857484 |
|---|
| End bp | 2858137 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644987328 |
|---|
| Product | predicted cobalamin binding protein |
|---|
| Protein accession | YP_003144939 |
|---|
| Protein GI | 257065267 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5012] Predicted cobalamin binding protein |
|---|
| TIGRFAM ID | [TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGTA AGGAAGAACT CATTCAGCGG ATGTACGACT GCGTCGTCGA GATGGAGGAC
GAAGACGTCG TGAACGCATG CAGGGAATAC CTTGCAGAAG GCTACGACGC CTACGACGGC
ATCATGGAAG GCCTCGTGGC CGGTATGAAC AAAGCCAGCG AGCTTTACGA CGAGGAGGAA
TACTTCGTAA CCGACGTGCT GCTCTGCTCG GATGCGCTGT ATGCAGGCTT GGACGTGCTG
CGTCCGCACC TCAAGAACGA CGAGTCGATG GGCGAAGCCA AAAAGGTCGT TATCGGTGTC
GTTGAGGGCG ATACGCACGA CATCGGAAAG AACCTCGTGA AAATCATGCT TGAAACCGCC
GGCTTCGAGA TGTACGACCT TGGCCGCGAC GTGCCCCTGA ACTCCTATGT CGAGAAGGCC
CAGGAGGTCA ATGCGGATAT CGTCGCCATG TCCACGCTCA TGACCACCAC CATGGGCGGC
ATGCGCACCG TCGTTGAAAA GCTCGGCGAA GCCGGCATCC GCGATCATGT GAAGGTGATG
ATCGGGGGCA GCCCCGTTTC CCGCAAGTTC GCCGATGAGA TTGGCGCCGA CGGCTACTCG
TCGAACGCCG TTGAAGCCGT GGCCGTCGCC AAGGAGCTCG TCGGCATGAA GTAG
|
|---|
| Protein sequence | MASKEELIQR MYDCVVEMED EDVVNACREY LAEGYDAYDG IMEGLVAGMN KASELYDEEE
YFVTDVLLCS DALYAGLDVL RPHLKNDESM GEAKKVVIGV VEGDTHDIGK NLVKIMLETA
GFEMYDLGRD VPLNSYVEKA QEVNADIVAM STLMTTTMGG MRTVVEKLGE AGIRDHVKVM
IGGSPVSRKF ADEIGADGYS SNAVEAVAVA KELVGMK
|
|---|
| |