Gene Shel_25790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25790 
Symbol 
ID8396467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand+ 
Start bp2851028 
End bp2851594 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content57% 
IMG OID644987323 
Producthypothetical protein 
Protein accessionYP_003144934 
Protein GI257065262 
COG category[S] Function unknown 
COG ID[COG2320] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAAG ATTTGTCGGA CATGACGCTG GAAGAGCTCT GGGAACTCTT CCCCATATCC 
CTCGTGGAGC ATAACGACGC ATGGCGTCAG CAATATGCGG AGATAGCGTC CGACATCGCC 
GAGCTGCTGT CCGACTACCC AGTTGAGAGG ATCAGCCACA TTGGCAGCAC CGCAGTGGAC 
GGCATTTGGG CCAAAAACAT TGTCGACGTC ATGGTCGAGC TTTCCGCAGG CGCCGACATG 
AAGAAGGCGG CGGAAGCGCT GGAGGGCGCC GGCTTCATTA TGATGTCGAA CGAGGGGAAT 
CGAATCTCCC TCAACCTCGG ATACACGAAA GACGGCTTCG CCGAGAAGGT CTACCACGTC 
CACCTGCGGT GCATCGGAGA CAACGACGAG CTGTATTTTC GCGACTACCT CAACGCGCAC 
CCCCAGACCG CCAAGGATTA CGAGGCCTTG AAGCTTCGCC TTTGGAAACA GTTCGAGCAC 
GACAGAAACG CATACACCGA CGCAAAAGCC GAGTTCATCA AGGCGGTAAC CGCCAAGGCC 
CGTGAAGAGC ACGCGGGAAG GTACTGA
 
Protein sequence
MGKDLSDMTL EELWELFPIS LVEHNDAWRQ QYAEIASDIA ELLSDYPVER ISHIGSTAVD 
GIWAKNIVDV MVELSAGADM KKAAEALEGA GFIMMSNEGN RISLNLGYTK DGFAEKVYHV 
HLRCIGDNDE LYFRDYLNAH PQTAKDYEAL KLRLWKQFEH DRNAYTDAKA EFIKAVTAKA 
REEHAGRY