| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_25680 |
|---|
| Symbol | |
|---|
| ID | 8396456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 2839546 |
|---|
| End bp | 2840157 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644987313 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003144924 |
|---|
| Protein GI | 257065252 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCAAAC CCGACGAGAG CATAGACCCG CGCATCTTGG AAAGCGCCCG GAAGGAATTC
CTTTCCAAAC CCTTCGACCA GGTGTCGTTG CGGGAGATCT GTGCGCAGGC GAATGTGACC
ACGGGCGCTT TCTACAAGCG TTACAAGAAC AAGGAGGAGC TGTTCGACGC GGTTGTGGCT
CCCACGCTGG CGCTGGTAGC GAAGTATTCC GACCAGCGGG AGTCCATCAG TTATGACCGC
CTGAGCGCGA AGGAGCTGCA GCTCATCTGG GAGCTCACGC CGGACACCCA GCGCGAAATC
ATCGATATGC TTTACGACAA CCACGACGGC TTCCGCCTGC TGCTGTGCCA CGCCGAAGGA
ACGCGCCATG CCAACTTCAT CCACGACTTC GTGAACGACG TGACCGCCCG ATCGTACCGC
TTCATCGAAG AAGCCCACAG GCGGGGCATC ATCGATGACG TGATCGACGA GGAGGAGTTG
CATATGCTTC TGACGGCCTA TTGGTCGACC ATGTTCGAAC CCATCGTCCA CGGTCTTCCC
CGGGAGAAAG CCATCCAGCA CAGCAATATT GTTGCGAAGC TGTTCGATTG GACCGCCGTG
CTCGGATTCT AA
|
|---|
| Protein sequence | MAKPDESIDP RILESARKEF LSKPFDQVSL REICAQANVT TGAFYKRYKN KEELFDAVVA
PTLALVAKYS DQRESISYDR LSAKELQLIW ELTPDTQREI IDMLYDNHDG FRLLLCHAEG
TRHANFIHDF VNDVTARSYR FIEEAHRRGI IDDVIDEEEL HMLLTAYWST MFEPIVHGLP
REKAIQHSNI VAKLFDWTAV LGF
|
|---|
| |