Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_25650 |
Symbol | |
ID | 8396453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2837013 |
End bp | 2837597 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644987310 |
Product | predicted transcriptional regulator |
Protein accession | YP_003144921 |
Protein GI | 257065249 |
COG category | [K] Transcription |
COG ID | [COG1476] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGTCG GCAAGACGAT CAAGGACCTG CGCACCAGGT CGGGAATGTC TCAGGAGGAA CTCGCGAAGA ACGTGTTCGT GAGCCGCCAG ACAGTATCTA GCTGGGAGAA CGAGAAGTCC TATCCGGACG TGCAGAGCCT CGCGTTGATT GCAGAGCTTT TCAACACCTC CATCGACGCC CTCGTGAAAG GAGACCTAGC CATGATCGAT CTGAGAATTG CAGAAGCCGA AGTGAAAACC CTCAAGCGTA ATGCAACCCT GTACGGAGTT CTTCTCGCGG TGTCCCTCGT GATCATGGTG GTGGCGTTTG CCCAGGAGAA CTGGCTTGCC CTCGCATCGG GCGCAGTCGT GTGGGCGCTG TCGCTGTACT TCGCCTTCCT TGTCGACCAC GACAAAAAGA AGTACGACGT GCAAACCTAC CGTGAAATCA GGGCGTTCTG CAACGGAGTG CCCATCGACG AAATCAAGGC GCAGCGCGAA TCCAAGCATC GGGGTATAGA CATTATGAAG AAAGCAATCA TCTGCGGAGG CGCCGGCGCA GCCGTCGGCG TGGCGACGGC GTGGATCGTG CGCCTGTTCT CGTAG
|
Protein sequence | MEVGKTIKDL RTRSGMSQEE LAKNVFVSRQ TVSSWENEKS YPDVQSLALI AELFNTSIDA LVKGDLAMID LRIAEAEVKT LKRNATLYGV LLAVSLVIMV VAFAQENWLA LASGAVVWAL SLYFAFLVDH DKKKYDVQTY REIRAFCNGV PIDEIKAQRE SKHRGIDIMK KAIICGGAGA AVGVATAWIV RLFS
|
| |