Gene Shel_25650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25650 
Symbol 
ID8396453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2837013 
End bp2837597 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content57% 
IMG OID644987310 
Productpredicted transcriptional regulator 
Protein accessionYP_003144921 
Protein GI257065249 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTCG GCAAGACGAT CAAGGACCTG CGCACCAGGT CGGGAATGTC TCAGGAGGAA 
CTCGCGAAGA ACGTGTTCGT GAGCCGCCAG ACAGTATCTA GCTGGGAGAA CGAGAAGTCC
TATCCGGACG TGCAGAGCCT CGCGTTGATT GCAGAGCTTT TCAACACCTC CATCGACGCC
CTCGTGAAAG GAGACCTAGC CATGATCGAT CTGAGAATTG CAGAAGCCGA AGTGAAAACC
CTCAAGCGTA ATGCAACCCT GTACGGAGTT CTTCTCGCGG TGTCCCTCGT GATCATGGTG
GTGGCGTTTG CCCAGGAGAA CTGGCTTGCC CTCGCATCGG GCGCAGTCGT GTGGGCGCTG
TCGCTGTACT TCGCCTTCCT TGTCGACCAC GACAAAAAGA AGTACGACGT GCAAACCTAC
CGTGAAATCA GGGCGTTCTG CAACGGAGTG CCCATCGACG AAATCAAGGC GCAGCGCGAA
TCCAAGCATC GGGGTATAGA CATTATGAAG AAAGCAATCA TCTGCGGAGG CGCCGGCGCA
GCCGTCGGCG TGGCGACGGC GTGGATCGTG CGCCTGTTCT CGTAG
 
Protein sequence
MEVGKTIKDL RTRSGMSQEE LAKNVFVSRQ TVSSWENEKS YPDVQSLALI AELFNTSIDA 
LVKGDLAMID LRIAEAEVKT LKRNATLYGV LLAVSLVIMV VAFAQENWLA LASGAVVWAL
SLYFAFLVDH DKKKYDVQTY REIRAFCNGV PIDEIKAQRE SKHRGIDIMK KAIICGGAGA
AVGVATAWIV RLFS