Gene Shel_25590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25590 
Symbol 
ID8396447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2832015 
End bp2832404 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content57% 
IMG OID644987304 
Productpredicted transcriptional regulator 
Protein accessionYP_003144915 
Protein GI257065243 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.6055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAT ATATGTCCTA CGAGGAGTAT CTTGCGAACG TCAAGAAGGG CATCTTGACC 
GACCGGGGGA ACTGCCCGGT GACTCCTCTT CTAACCATGC TGCGCGGCAA ATGGAAGACG
CAGGTGCTCT ACGAGTTCTG CGTGCATGAC CGCGTACGGT TCTGCCAACT GAAGAAGGAC
CTTCCTGGCA TAACGAATAC GATGCTTTCC ACCACGCTGC GCGAGCTGGA GTCCGACGGG
CTCATCTTCC GGGAGCAGTT CAACGAGATT CCGCCGCGGG TCGAGTACGG CTTCACCGAG
ATGGGTCGCG ATCTGCTGCC CGTGTTCTAC GAGATCATGC GTTGGGGATT CAAACACGAA
AACGAGGTGC TTGCCGGCAG CGTCGACTAA
 
Protein sequence
MAEYMSYEEY LANVKKGILT DRGNCPVTPL LTMLRGKWKT QVLYEFCVHD RVRFCQLKKD 
LPGITNTMLS TTLRELESDG LIFREQFNEI PPRVEYGFTE MGRDLLPVFY EIMRWGFKHE
NEVLAGSVD