Gene Shel_25560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25560 
Symbol 
ID8396444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2830025 
End bp2831236 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content62% 
IMG OID644987301 
Productpredicted acetyltransferase 
Protein accessionYP_003144912 
Protein GI257065240 
COG category[R] General function prediction only 
COG ID[COG4552] Predicted acetyltransferase involved in intracellular survival and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.842798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCC TTGTACGGAA GCTGGAAACC GAAGCCGAAC GGCTTCAAGC GGAGCATCTC 
ATTGCCACGG CGTTTTTGCA TGACCAGGAC GAATCCGAGG CGAAGCAGAA CGCCGAGCAC
CCCATGGGAG ACGTATGGGG CGCCTTCGAC GAATCTGCCC GCATGACCTC GGCCGCCACG
ACGATCCAGC ATCGCATGAC CTTTGACGGC GGCATCGTCG ACTGCACGGA GCTCCACATG
ATAGGCACCC TGCCTGAAGC CCGGGGCGGC GGCGCAGCTC GCACGATGAT GAACGCCATG
CTGCGGGAAT ATCGTTCCGC CGGGCACATG TTCGCCCTGC TCATCCCCTT CTCGTTCGCG
TTCTATAGGA AATTCGGCTT CGAATCTGCA TCGGAGATGC TGGTGCAGAA GGCAGGCATC
GACCAGTTTT CAGGGTTCCA GCAGGAACTT ACGGCGAAGC GCGTCGAACG TCAGGAGGAT
GCTGACGCGG CCCGCAAGGT GTACGAGGCC TTCGCCCTTC GCTACAATCT CGCGAATCTG
AAATCGCCGC GGGATTGGGA GCTCCGCGGC AACGGCGAAG TCGGCGAGCG CAGCTGGGAC
CACCGCGACA AGACCCACTA CAGTTACCTG TTCCTGGACG AGGACGGAAC GGCCCAGGCG
TACTTCACCT TCGTCTACGT CGTCGGCCCC GAAACCCCCT GGACAGGAAC ATTGGCCGTG
ACCGAGCTGG CCTTCGCCAC GCCCGACGCG CTGCACAGCG TGTTCGGATT CATATACGGC
ATGCGCGCCA AGGCTACCGG CGTCAGTATG GAACTGCCAG TTGACCTGGA CCTAAGTGTA
TTCCTTCCCG AATGCGGCAA CGTCGAGCGC AGTCTGGACG GCCACGTGAT GGCCCGCGTG
CTGGACGTCG AACGGGTGCT GCGCGCCATG CGCCATCCCG AAGGCGCCGG CGCATATCGC
ATCCGTGTGG AAGACGCCGT GCTGGAAGAA AACACCGGAA CGTACGCGGT GCGGTTCGCC
GACGGCAAGG CGACCGACGT TTTCAAGACC GATGAGGCCG CCGACCTGGA GGTGACGGTG
GAAACCTTCT GCCAGCTGGC GGTGGGGCGC ATCGATCTTA ACGCAGCCCC ATACCGGCCG
AACGCAAAGC TGAACTCCAA CGCCGACCTA TTGAAACGCG TCTTCGTCAG GAAGCCAATG
TATCTGCGGT AG
 
Protein sequence
MTILVRKLET EAERLQAEHL IATAFLHDQD ESEAKQNAEH PMGDVWGAFD ESARMTSAAT 
TIQHRMTFDG GIVDCTELHM IGTLPEARGG GAARTMMNAM LREYRSAGHM FALLIPFSFA
FYRKFGFESA SEMLVQKAGI DQFSGFQQEL TAKRVERQED ADAARKVYEA FALRYNLANL
KSPRDWELRG NGEVGERSWD HRDKTHYSYL FLDEDGTAQA YFTFVYVVGP ETPWTGTLAV
TELAFATPDA LHSVFGFIYG MRAKATGVSM ELPVDLDLSV FLPECGNVER SLDGHVMARV
LDVERVLRAM RHPEGAGAYR IRVEDAVLEE NTGTYAVRFA DGKATDVFKT DEAADLEVTV
ETFCQLAVGR IDLNAAPYRP NAKLNSNADL LKRVFVRKPM YLR