Gene Shel_25550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25550 
Symbol 
ID8396443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2828370 
End bp2829587 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content59% 
IMG OID644987300 
Productalcohol dehydrogenase, class IV 
Protein accessionYP_003144911 
Protein GI257065239 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.120738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAT ATATCAATCC GCGGTTCGTT TACCATGGCG AAGGCGCCCT CGACGCCCTG 
AAGGGACTGA AGGGCAAGAA GGCCGTCATC TGCATAGGCG GCGGCTCCAT CAAAAGGCAC
GGGCACCTCG ACACTATCGA AGCCAATCTT GCTGAAGCGG GCTTCGAAAC CAGGCTCATC
GAAGGCATCG AGTCCAATCC TTCCGTTGAA ACCGTGCTTG CAGGCGCGAA GGTGATGCAG
GAATTCGGCC CTGATTGGAT CGTCGCTGTA GGCGGAGGCT CGCCCATCGA TGCGGCAAAG
GCCATGTGGG TCAAGTACGA ATATCCTGAC ATCACATTCG AGCAGATGTG CACGCCGTTC
GGCCTGCCCG AAATGCGCAC GAAGGCGAAG TTCTGCGCCA TCACCACCAC ATCCGGCACC
GGCACCGAGG TTACGGCGTT CGCCGTGATC ACCGATGTGC ACAAGGGCAT CAAATACCCC
ATGGCCGATT TCGAGATCAC GCCCGATGTT GCGATCGTCG ACCCGGCGCT TGTCGCCGCA
CTGCCTCAGA AGCTGGTGGC GTTCACGGGT ATGGACGCGC TGACCCATGC GATTGAGGCG
TACGTGTCGA CTGCCCGCAG TTGCTATACC GACGCCATGG CACTTCATGC CATCAAGATG
ATCCAAGGCA ACCTGCTCGA ATCCTACAAG GGCGACCCGA CGGCGAGGGC CGCCATGCAC
GATGCCCAAT GCCTGGCCGG CATGGCGTTC TCCAGCGGTT TGCTGGGCAT CGTTCACTCT
ATGGCGCACA AGACCGGCGC CGTCTACGAT GGCGGGCACA TCATCCACGG CTGCGCCAAT
GCGATGTATT TGCCGAAGGT TATCAAATAC AATGCCGGAA ACGCAGTCGC AGCCGATCGG
TATGCGGAAA TCGCCGACGC GATAAACCTC GGCGGCATCA CGCGTGCAGA AAAGGTCGAC
GCGCTTATCC AGTTCTGCTT GGCATTCAAC CATGAGATGA ACATCCCGAA CTGCATCAGC
GAGTACGGCG AAGGCGGCCG CAAGGTCGAG GCGGGACAGG GCATTGTCAC CCAAGCCGAG
TTCGAGGACA AGCTGAGTTC CGTTGCGGCG AACGCGCTGC TTGACGCCTG CACGGCGTCC
AACCCCCGGC CTATCGACCA AGGCCTGATG GAGCGTCTGC TGAACGCCGT CTACTTCGAC
GAGGAAGTCC TCTTCTAA
 
Protein sequence
MKQYINPRFV YHGEGALDAL KGLKGKKAVI CIGGGSIKRH GHLDTIEANL AEAGFETRLI 
EGIESNPSVE TVLAGAKVMQ EFGPDWIVAV GGGSPIDAAK AMWVKYEYPD ITFEQMCTPF
GLPEMRTKAK FCAITTTSGT GTEVTAFAVI TDVHKGIKYP MADFEITPDV AIVDPALVAA
LPQKLVAFTG MDALTHAIEA YVSTARSCYT DAMALHAIKM IQGNLLESYK GDPTARAAMH
DAQCLAGMAF SSGLLGIVHS MAHKTGAVYD GGHIIHGCAN AMYLPKVIKY NAGNAVAADR
YAEIADAINL GGITRAEKVD ALIQFCLAFN HEMNIPNCIS EYGEGGRKVE AGQGIVTQAE
FEDKLSSVAA NALLDACTAS NPRPIDQGLM ERLLNAVYFD EEVLF