Gene Shel_25500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25500 
Symbol 
ID8396438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2822948 
End bp2823502 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content62% 
IMG OID644987295 
Productpredicted phosphoesterase or phosphohydrolase 
Protein accessionYP_003144906 
Protein GI257065234 
COG category[R] General function prediction only 
COG ID[COG4186] Predicted phosphoesterase or phosphohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCT ACATCTCGGA CACGCATTTC GGACATGCCG GCATCATCGG GCTGTGCGAG 
CGGCCCTTTC GCTCCGTCGA CGAGATGGAC CACGCGCTGA TCGACAATTG GAACGCCCGC
GTAGGCGCCG ATGACGACGT ATGGCACCTA GGCGATTTCG CGTACAGGGG CGACAAGCCG
TGCGCGCACT ACCTGTCGAA GCTCAACGGT CGGATTCATC TGCTGATCGG CAACCACGAC
CAGACAACAC TGATGCGGGA GCCCGAGGCG CTTGCGATGC TGGCGTCCTG CGATTTCGCC
ACCACGCGAA TCGACGGGCT GAACCGGCGC ATCTGGATGT GCCACTACCC GCTGGCTTTG
CCGCCGAAAC GCACCTGGGC GCTGTACGGG CACGTGCATA ACGATGCGAA CCCCGAAGGT
TTTCCCGCAT GGCCCCTGGT GAAGACCATG GACATGGCGC TCAACTGCTG CGTGGAGGTG
AACGGGTACA TGCCGGTGAC GTTCGAAGAG CTGGTCGTGA ACAATGAGCG CCTCCGTAAG
GAGTGGCGCG GCTGA
 
Protein sequence
MDFYISDTHF GHAGIIGLCE RPFRSVDEMD HALIDNWNAR VGADDDVWHL GDFAYRGDKP 
CAHYLSKLNG RIHLLIGNHD QTTLMREPEA LAMLASCDFA TTRIDGLNRR IWMCHYPLAL
PPKRTWALYG HVHNDANPEG FPAWPLVKTM DMALNCCVEV NGYMPVTFEE LVVNNERLRK
EWRG