| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_25400 |
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| Symbol | |
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| ID | 8396428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2813334 |
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| End bp | 2814662 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644987285 |
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| Product | selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family |
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| Protein accession | YP_003144896 |
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| Protein GI | 257065224 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01918] selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000639897 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.348983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA AAGTTATTTA CTACGTGAAT CAGTTCTTCG GCGGCATCGG CGGTGAGGAC
ACTGCTGATT TCGAGCCGGA AATCCGCGAA GGCCAGGTCG GCCCTGCCGT GGCAGCCAAT
GGCCAGCTCA AGGATGCTGA GATCACTCAC ACCATCATCT GCGGTGACAA CTTCATGGGT
TCCAACACCG AAGAGGCACT GTCCCGCATC CTTGGCTTCC TCGAGGACAA GGAATTCGAC
CTGCTGATCG CCGGTCCTGC ATTCCAGGCA GGCCGTTACG GCGTCGCATG CGGCAACGTG
TGCAAGGCTG TCGGCGAGAA GTTCGGCGTT CCCACCGTCA CTTCGATGAA CGTCGAGAAC
CCCGGCGTTG AGATGTTCAA GAAGGACACC TACATCATGG ACGGCGCCAA CGCCGCTGCC
AAGATGCGCA AGGACCTCAA GAACCTGGTT GGCTTCGCCA ACAAGCTGCT CTCCGGCGAG
CCCCTGCAGG GCGCCGAGAT TGAGGGCTAC TTCCCCCGTG GCATCCGTCA CGAGATTTAT
CTCGAGGACA AGCATGAGAA CACCGCTGCT TACCGTGGCG TTCAGATGCT GATCAAGAAG
ATCAAGGGTG AGCCCTTCCA GACCGAGCTC GTCGTTCCCG TCAAGGACGT CGTCGAGCCC
GCTGCTCCGG TCAACCTGAG CGAAGCCGTT ATCGCCATGA TCACCACCGG CGGTATCGTC
CCGGTCGACA ACCCCGACCG CATCCAGTCC GCTTCCGCTA CCCGTTGGGG CCGTTACAAC
ATCGAGGGTG TTGACAAGCT CCCCAACCGT GCTTCCGGCG GCTACAAGAC GATTCATGCA
GGCTTCGACC CCGCTGCGGC CGACGCCGAC CCGAACGTCA TCATGCCTAT CGACGCTATG
CGTCAGCTGG AGAAGGAAGG CAAGTTCGCT CGCCTGCACA ACTACTTCTA CTCTACGGTC
GGCACCGGCA CCACTGAGTC CGAGGCTGCC CGTATGGCCG AGGAAATGAT TCCGTACCTC
AAGGAGGACG GTGTTAACGC CATTATCCTC GGCAGCACTT GAGGCACTTG TACTCGTTGC
GGTGCAACGA TGGTTAAAGT GTTCGAGCGC GCTGGTTTCC CGATCGTCCA TATGTGCAAC
CTGATCCCGG TTTCGACCAC GGTTGGCGCA AACAGGATGG TCCCGACCAT CTCGATTCCG
TATCCTCTGG GCGACCCCAA CACGCTGCCT GAAGAGCAGT GGAAGCTGCG CTATCATCGC
TGCGGCGTCG CCGTTGATGC GCTTGCTACG CCCGTCGAGG GCCAGACCGT CTTCAAGGTC
AAGATCTAA
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| Protein sequence | MTKKVIYYVN QFFGGIGGED TADFEPEIRE GQVGPAVAAN GQLKDAEITH TIICGDNFMG
SNTEEALSRI LGFLEDKEFD LLIAGPAFQA GRYGVACGNV CKAVGEKFGV PTVTSMNVEN
PGVEMFKKDT YIMDGANAAA KMRKDLKNLV GFANKLLSGE PLQGAEIEGY FPRGIRHEIY
LEDKHENTAA YRGVQMLIKK IKGEPFQTEL VVPVKDVVEP AAPVNLSEAV IAMITTGGIV
PVDNPDRIQS ASATRWGRYN IEGVDKLPNR ASGGYKTIHA GFDPAAADAD PNVIMPIDAM
RQLEKEGKFA RLHNYFYSTV GTGTTESEAA RMAEEMIPYL KEDGVNAIIL GSTUGTCTRC
GATMVKVFER AGFPIVHMCN LIPVSTTVGA NRMVPTISIP YPLGDPNTLP EEQWKLRYHR
CGVAVDALAT PVEGQTVFKV KI
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