Gene Shel_25380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25380 
Symbol 
ID8396426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2810575 
End bp2811477 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content60% 
IMG OID644987283 
ProductFe-S oxidoreductase 
Protein accessionYP_003144894 
Protein GI257065222 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.76381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.564969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTACG AGGGTCGCAT CTGCCGCACA CCCGGAGAGC GCGCGTCGTA CAAGCTTCCC 
ATCTCCGTCG GATGCCCGTA CAACGCCTGT GCTTTCTGCG ACTTGTTCAA GGACTTGCAA
TACCGCGAGC TTCCCATCGA GCAGGTCGAA ATGGAACTGG CCCGCGTTCA CGACCTTGGA
GGCAAGCCCG AACGCATCAT GTTGGGCGAT GGCAACGCCT TCTACATGGA TTTCGAACGG
CTGAAGGAAA TCATCCTGCT CATCGAGCGG TACCTTCCCT CCTGCACGTT CATCTCAAGC
GACGCCTCGA TTCCCTCCAT CGCCGCCAAG ACCGATGAAG AACTTGCCTG GCTCGCCGAG
CATAACTACA AGCTGGTCTA CATCGGCATC GAGTCCGGCT TGGACGACGT GCTGGACTTC
ATGCTGAAGG ACCACGACAA TGCCGAATGC CGCGAGCAGA TCGCGCGGCT GCATGCGGCG
GGTATCGAAT ACGGTGCCCA CATCATGACG GGCGTGGCCG GCGCAGGTCG CGGGTTGGAA
AACGCCCGCG CCACCGCAGC CCTGCTCAAC GAGACGCGCC CCGTTTCGGT CTGCAACTTC
TCCATGGGCG TCTCCCCCAC TACCACCTTG GGCAAATGGG CGAAAGAGGG ACGGTTCACC
CCTGCCCCGG TGCTCGAATG CCTTGAGGAA GAGCGGGAAC TCATCTCCCT GCTCGACATC
CCCGTGCATT TCGAAGGCTT CCATTTCGAC TACGACCGGG AGAAGGCAAG CTGCCCCGAA
TGCACTGGCG ACACCGCAGA GTTCAACGAC TTCATCACGG CATGGACGCA TACCCACGGG
GAACTTCCGA AAGACCGCAA GAACCTGCTC GAGCAGATAG ACCACGCGCT TGCCGTTCGC
TAA
 
Protein sequence
MDYEGRICRT PGERASYKLP ISVGCPYNAC AFCDLFKDLQ YRELPIEQVE MELARVHDLG 
GKPERIMLGD GNAFYMDFER LKEIILLIER YLPSCTFISS DASIPSIAAK TDEELAWLAE
HNYKLVYIGI ESGLDDVLDF MLKDHDNAEC REQIARLHAA GIEYGAHIMT GVAGAGRGLE
NARATAALLN ETRPVSVCNF SMGVSPTTTL GKWAKEGRFT PAPVLECLEE ERELISLLDI
PVHFEGFHFD YDREKASCPE CTGDTAEFND FITAWTHTHG ELPKDRKNLL EQIDHALAVR