| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_25370 |
|---|
| Symbol | |
|---|
| ID | 8396425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2809807 |
|---|
| End bp | 2810430 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644987282 |
|---|
| Product | Zn-dependent hydrolase, glyoxylase |
|---|
| Protein accession | YP_003144893 |
|---|
| Protein GI | 257065221 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.555955 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGGTGA CACGATTGGT CATGGGGATG ATCGACAACA ACGTTTACAT CGTCGATGAC
GGTGAAGGCT GCTTCATCGT CGACCCGACC TGCGACCCCG ATACCATCAT GGAAGCCGTC
GGCGACCGCA AGGTCAACGC GATTGTTTTG ACGCATGGCC ATTGGGATCA CGTTGGCGCC
GCCCATGCAT TGCGTGAAGC GACGGGGGCC GAAGTGATCT GCAGTGCGAT TGAAGAGCCT
TATATCAACG GCGAAAAGTC GTTCGACGAG TACACCCGTT GCGACCCGTG TTCGATCGAC
CGCACGGTGG CTGATGGTGA CGTTCTGGAA ATCGGAGACG TGCAGCTCAA GGTTATCGCA
ACGCCAGGCC ATACGCCAGG CGGCATCTGC CTGTATACGG CTCCGACAAA GGACAGGCCG
GGATACCCTG TGGTCTTCTC CGGCGACACC CTGTTCGCAG GAACGCACGG TCGCGTGGAC
TTTGAAGAGG GCAACATCGA CGACATGCGC GAATCGTTGG TGAAACTTTC GTACCTGCCG
CCTGAAACGG TGGTCATGCC CGGTCACAAT GGGTTGACCG CGATAGCTCG TGAACTCGGG
TGGCTGAAGA TCTGCCGCTT GTAA
|
|---|
| Protein sequence | MSVTRLVMGM IDNNVYIVDD GEGCFIVDPT CDPDTIMEAV GDRKVNAIVL THGHWDHVGA
AHALREATGA EVICSAIEEP YINGEKSFDE YTRCDPCSID RTVADGDVLE IGDVQLKVIA
TPGHTPGGIC LYTAPTKDRP GYPVVFSGDT LFAGTHGRVD FEEGNIDDMR ESLVKLSYLP
PETVVMPGHN GLTAIARELG WLKICRL
|
|---|
| |