| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_25360 |
|---|
| Symbol | |
|---|
| ID | 8396424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2808680 |
|---|
| End bp | 2809624 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644987281 |
|---|
| Product | selenium donor protein |
|---|
| Protein accession | YP_003144892 |
|---|
| Protein GI | 257065220 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0709] Selenophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00476] selenium donor protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.592311 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAAG ACGTTATGCT CGGCTTCGAG ACCAGCGACG ACTGCGCGGT ATACAAGCTG
CGCGACGACC TGGTCGCTGT GCTGACGCTC GACTTCTTCA CGCCGGTGGT GGATGACCCC
TACGAGTTCG GCTGCATCGC GGCCAGCAAC GCGCTTTCGG ACGTGTTCGC CATGGGCGTC
AAGCCTCTGG CGGCGTTGAA CATCCTGGCG TTCCCCGTGG CGCTGGGCAC CAGCGTGGTG
GCCGAAGTGA TGCGCGGCGG TTCCGATAAG GTGCGCGAAG CAGGCGCCTT CATCGTCGGC
GGGCACTCCA TCGATGACGA TGAGCCCAAA TACGGCCTGG CCGTGTTCGG CACCGCGCAT
CCCGACGAGA TCCTGCGCAA CGGCGGCGCT GTTTCCGGCG ACGTGCTGTA CTACTCCAAA
CCCATCGGCA TGGGCATCAT GAACTCGGCG TTTGCCGCCA AGATGGAAGA CGACCAGAGC
ATGCGCCCCG CCATCGAGGC CATGATGGAG CTCAATCGCT ATGCGGCCGA GGCGTTCGAG
GGTCTGGACG TGCACGCCTG CACCGACGTG ACCGGTTTCG GTCTGGCGGG CCATCTGCAT
GAGATGCTCG AGCCCAGCAA GATGGCTGCG ATTCTCGATT GGGACAACCT GCCCCTGTTC
GACGGCGTGT ACAACTACTC CGCAATCGGC TGCCGCCCCG GCCGCAGCTA CGACGTGCAG
GAGTGGGCGG AGGAGTTCGT CCGCAAAGGC ACGCTCTCCG AAGAGGAATA CAACACCCGC
ATGGGCGTGC TCTGCGACCC GCAGACGTCC GGCGGCCTGC TGCTGGCGCT GCCTCCCGAG
CAGGGCCCTG CCTACGAGGC CAAGTTCGAA GAGCTGCTCG GTCGCAAGCC CGCCCGCATC
GGCGAAGTGA CCGACGGCCC CACCGGCACC ATCTTCATCC GTTAG
|
|---|
| Protein sequence | MDEDVMLGFE TSDDCAVYKL RDDLVAVLTL DFFTPVVDDP YEFGCIAASN ALSDVFAMGV
KPLAALNILA FPVALGTSVV AEVMRGGSDK VREAGAFIVG GHSIDDDEPK YGLAVFGTAH
PDEILRNGGA VSGDVLYYSK PIGMGIMNSA FAAKMEDDQS MRPAIEAMME LNRYAAEAFE
GLDVHACTDV TGFGLAGHLH EMLEPSKMAA ILDWDNLPLF DGVYNYSAIG CRPGRSYDVQ
EWAEEFVRKG TLSEEEYNTR MGVLCDPQTS GGLLLALPPE QGPAYEAKFE ELLGRKPARI
GEVTDGPTGT IFIR
|
|---|
| |