Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_25310 |
Symbol | |
ID | 8396419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2803521 |
End bp | 2804954 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644987276 |
Product | seryl-tRNA(Sec) selenium transferase |
Protein accession | YP_003144887 |
Protein GI | 257065215 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.362155 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCGT CTGTCAATAC GAAGCTGTTC AGGCAGCTTC CCCAAGTCGA AGAAGTGCTG CATGACAAGG CGCTGACCTC TATCACCGAT GTTCCGCGCG ACATCGCCAC CAGTGCCGTT CGGGCTGAAG TCGATGCACG GCGCCAAGAG ATACTGAACG GCGGAACGCC CGAGCTCAGC CTGGCCGACA TCGCGGCTGC AGCCGCCAAG CGCGTGCAGC TCCTCACGGC TCCGTCCCTG CGTCGGGTCG TGAACGCGTC TGGTGTCATC ATCCATACGA ACCTCGGTCG AAGCGTGCTT GCCGAAGAGG CCGTCGCGGC CGTCAACGAG GTCATCGTGG GGTATTCGAC CCTCGAGTAC GACCGCAAGA CCATGGCCCG CGGCAGTCGC CACGACCATT GCGAGTCGCT CATCTGCACG CTGACCGGCG CCGAGGCGGG CATCGCCGTC AACAACAACG CCGCCGCCGT CATGATGGTG CTCTCCACCT TCGCAGCCGG CCACGAGGCT ATCGTCTCCC GCGGCGAACA GGTCGAAATC GGCGGCTCCT TCCGCATTCC CGAGATCATG CAGCAGTCCC ATGCGCACAT GATCGAGGTG GGCGCCACCA ACAAGACCCA TCTGAGCGAC TACGAGCGCG CATTGACCGA CGACACGGCC ATGATGCTCA AAGTCCATCC TTCCAACTAC CGCATGACGG GCTTCACCGA GTCGGTGTCC ATCCACGACC TGCACAACCT GGCGGTCGAG CATGAAAAGG CCACCGGCAA GAAGGTGCTC GTCTACGAGG ACCAGGGTTC GGGCGCGTTT TTGAGGCTGG CCGCCTTCGG CAAGTACGCC GAACCCGCCG TGGCCGAATC CCTGGCCGCC GGCGCCGACA TCGTTTCGTT CTCGGGCGAC AAGCTGCTGG GCGGACCCCA GGCGGGCATC ATCGTGGGTC GTGCCGACCT CATCGAGAAG TTGAAGAAGA GCCCGCTCGC CCGTGCCCTT CGCCTTGACA AGATGACCCT TGCCGCGTTG GAGGCCACGC TGCGCATCTA TCTGCATCCC GAGAAAGCGA TGACCCGCAT TCCGACGGTG CGCATGCTGG TCGAAAGCCC CGAAGAGGTC CGCGAGCGCG CATGCGCCCT GCGCGACATC GTGGCCAAGA ACATCGACCC CGACTTGGTC GACCTTGAAA TCGTCGAGGA AACGTCCCGT GCAGGCGGCG GTGCCTTGCC GATGTGCGAC ATCCCCACTT ATGCGATGCG GATGCGCTTC CGCAAGGGCA ACGCTCAGGA TTGCGAGAGG TATCTCATCC AGGAATCCCC GGTTATCGTT GTGGCCCGCA TTCACGATGA GGCCATCCTC TTCGACGCGC GCACCATTCT CAGCGAGGAG GAGATGAAGG CCATCGCGTT GGGCATCGCC TTGTATTTCG ATAAGATCAA ATAA
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Protein sequence | MSPSVNTKLF RQLPQVEEVL HDKALTSITD VPRDIATSAV RAEVDARRQE ILNGGTPELS LADIAAAAAK RVQLLTAPSL RRVVNASGVI IHTNLGRSVL AEEAVAAVNE VIVGYSTLEY DRKTMARGSR HDHCESLICT LTGAEAGIAV NNNAAAVMMV LSTFAAGHEA IVSRGEQVEI GGSFRIPEIM QQSHAHMIEV GATNKTHLSD YERALTDDTA MMLKVHPSNY RMTGFTESVS IHDLHNLAVE HEKATGKKVL VYEDQGSGAF LRLAAFGKYA EPAVAESLAA GADIVSFSGD KLLGGPQAGI IVGRADLIEK LKKSPLARAL RLDKMTLAAL EATLRIYLHP EKAMTRIPTV RMLVESPEEV RERACALRDI VAKNIDPDLV DLEIVEETSR AGGGALPMCD IPTYAMRMRF RKGNAQDCER YLIQESPVIV VARIHDEAIL FDARTILSEE EMKAIALGIA LYFDKIK
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