| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_25290 |
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| Symbol | |
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| ID | 8396417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2799163 |
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| End bp | 2801001 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644987274 |
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| Product | putative glutamate synthase (NADPH) small subunit |
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| Protein accession | YP_003144885 |
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| Protein GI | 257065213 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.126958 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCATGC TTTCGGTAGC TCCGAAGTCG GCGTACGACA GCCGTATAGC CGATGTCCTA
GGGCCGTTCC AGCGCAGAAT CGAGGCTATG CCTCCTGGAA CGTGCCCGAT TGCAGTGCAG
TTGGTGCTGC TTGAAACCGG CGGCGCCCAG ACGTGCGGCA AGTGCGTTCC GTGCCGCGAC
GGCATTCCAC AGCTTGCAGC GTTGATGCGC AGCGTGCTCA ACTGCGAAGC GGACGAGTGT
ACGCTTGACA CCATGCGTCA GCTGGCTCAG ATGATCAAAG ACACCAGCGA CTGCGCCATC
GGTTACGAGG CCGGCAAAAT GGCTCTTGAG GGTCTCGATG CGTTCGCAGA GGAATATCGG
AGCCACGTCC AGAACAAGAT GTGTGCCGAA GGCGTGGGTC AGACCGTGCC TTGCGAAACC
AAGTGCCCTG CACATGTGAA CATTCCCGCA TACATTGGGC TTGTTCTTGA GGGCGACTGC
GAAGGTGCCG TCAAGATGAT TCGCAAGGAC AACCCGTGGC CCACGGCTTG CGCGCTCATC
TGCGAGCATC CGTGCGAGGC CCGCTGCCGC CGTACGCTGA TCGATGCGCC GCTGAACATT
CGCGGCATCA AGAAGTACGC GGTTGACAAC GCCCCGGCCG ACACGGTGCC CGTTCCGAAG
CGCCTGCCTG ATTCGGGCCG AAAGGTCGCT GTCGTCGGCG GAGGCCCCTC CGGTTTGACC
TGCGCTTACT ATCTGGCGCT TATGGGCCAT CAGGTCACCG TGTACGAAGG CCGCAAGAAG
CTTGGCGGCA TGATGCGCTA CGGCATCCCG GCCTACCGTT TCCCGCGCGA GCGCATCGAC
CAGGACATTC GCGCCATCCT TTCCGTGGGC GGCATCGATG TCCGTTACGA GACCATAATC
GACGACGTCG AAATGGCCCG TCTCTCCTAT GATTACGACG CCATCTATGT AGCCGTGGGC
GCCCAGGGCG GCAAGAGCCT CAAGATCGAC GGCGTCGACG CCAACGGCGT CATGAGCGCG
GTTCAGCTGC TGGAGCGCAT CGGCGACGGC GACTATCCCG ACTTCTCGGG CAAGAAGGTC
GTCGTCATCG GCGGCGGCAA CGTGGCCATG GACTGCGCCC GCACCAGCGT GCGTGCCGGG
GCCGAAGAGG TCACCGTCGC GTATCGTCGT CGCATCGAGG ACATGACGGC CCTTCATGAG
GAAATCGAAG GCGCCATGTC CGAAGGCGTC GAGTTCATGA CGCTGCAGTC GCCTTTGCGC
ATCGAGAAGG ACGAGGACGG CAACGTGGCA GCCCTGATCT GCCAGCCCCA ATACATCGGC
GCCGTGAAGC GCGGACGTCC GGCTCCGGTG GATGCCAACA AGCCGACCGT GCGGCTCGAG
GCGGACATCA TCCTGATCGC CGTCGGCCAG GACATCCATT CCGCGCCTTT CGAGAAGTTC
GGCATGAAGG CGGAGCGCAC CCGCTTCGTC GCAGACGAGA ATCTGCGTGC CGAAGGCTTC
AAGAACATCT TCGTCGGCGG CGACTGCCAA ACCGGTCCCA AATCGGCCAT CATGGCCATC
GGCGCCGGCA AGGTGGCTGC TCGCAACATC GACGAGTACC TGGGCTTCCA TCACAAGCTC
GACCCCGAGG TCGAGGTGCC CAAGGCCCGT CCCAACGTTC GCGAGGCCTA CGGCCGCGTA
AACATCGTCG AGCGTCCGGC CCGCGAGCGC GGCCGCGACT TCGACCATAT CGAGATTCCC
CTCTGCGAAG AGGAGGTCAT GCAGGAGTGC AGTCGTTGCT TGCGTTGCGA TGCCTTCGGT
TGCGGAGTTT TGGAAGGGGG TAGGGTCCAG TATGTCTAA
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| Protein sequence | MTMLSVAPKS AYDSRIADVL GPFQRRIEAM PPGTCPIAVQ LVLLETGGAQ TCGKCVPCRD
GIPQLAALMR SVLNCEADEC TLDTMRQLAQ MIKDTSDCAI GYEAGKMALE GLDAFAEEYR
SHVQNKMCAE GVGQTVPCET KCPAHVNIPA YIGLVLEGDC EGAVKMIRKD NPWPTACALI
CEHPCEARCR RTLIDAPLNI RGIKKYAVDN APADTVPVPK RLPDSGRKVA VVGGGPSGLT
CAYYLALMGH QVTVYEGRKK LGGMMRYGIP AYRFPRERID QDIRAILSVG GIDVRYETII
DDVEMARLSY DYDAIYVAVG AQGGKSLKID GVDANGVMSA VQLLERIGDG DYPDFSGKKV
VVIGGGNVAM DCARTSVRAG AEEVTVAYRR RIEDMTALHE EIEGAMSEGV EFMTLQSPLR
IEKDEDGNVA ALICQPQYIG AVKRGRPAPV DANKPTVRLE ADIILIAVGQ DIHSAPFEKF
GMKAERTRFV ADENLRAEGF KNIFVGGDCQ TGPKSAIMAI GAGKVAARNI DEYLGFHHKL
DPEVEVPKAR PNVREAYGRV NIVERPARER GRDFDHIEIP LCEEEVMQEC SRCLRCDAFG
CGVLEGGRVQ YV
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