Gene Shel_25210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25210 
Symbol 
ID8396409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2789056 
End bp2789379 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content59% 
IMG OID644987266 
Productthioredoxin domain-containing protein 
Protein accessionYP_003144877 
Protein GI257065205 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000120815 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.576293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGC TCGAACTCGA TAAGAAGACC TTTGCTCCCG AGGTTCTGGA AGCCGAAGGC 
ACCATCCTCG TTGACTTCTA CGGCGACGGC TGCGTCCCCT GCGCCGCCCT GATGCCCCAT
GTGCATGAGC TCTCTGACAA GTACGACGGT CAGCTGAAGT TCTGCGCTCT GAACACCACC
AAGGCTCGTC GCGTTGCCAT CGGCCAGCAG GTCGTCGGTC TGCCCACCGT CGCCATCTAC
AAGAATGGCG AGAAGGTCGA AGAGGTCTGC AAGGACGACG CTACCCCCGA GTCTGTCGAG
GAAATGATCA AGCGCAACCT CTAA
 
Protein sequence
MSMLELDKKT FAPEVLEAEG TILVDFYGDG CVPCAALMPH VHELSDKYDG QLKFCALNTT 
KARRVAIGQQ VVGLPTVAIY KNGEKVEEVC KDDATPESVE EMIKRNL