| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_25150 |
|---|
| Symbol | |
|---|
| ID | 8396403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2782033 |
|---|
| End bp | 2782896 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644987260 |
|---|
| Product | formate/nitrite transporter family protein |
|---|
| Protein accession | YP_003144871 |
|---|
| Protein GI | 257065199 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2116] Formate/nitrite family of transporters |
|---|
| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.796989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGGAA TTTCGGCACA GGACATTGCG GCTACCAAGC CGGATTGTCG CGGAGCGGCG
GCTTTGTTTG CGCAGGCGCA GAACGTCGCA ATCGGAAAGA CCAAGCTGAC CCCGCTCAGC
ACGTTCGCAC TTGCGGTCAT GGCAGGCATG CTGATCGCCA CGGGCGCTAC GTTCATGTTG
CTCGTAAAGG GCGACACCAA CCTCGGATTC GCCGCATCGC AGCTGCTGGG CGGCCTGTGC
TTCTCCTTGG GCCTGCTGTG CGTCATCATC GCCGGTGCCG AGCTGTTCAC CGGCAACTGC
CTGATGGTCT GCGCCGCCGC TGACAAGAAG ATCAGCTGGG GCGCCGTCCT GAAGAACTGG
GGTATCGTGT ACGTCGGCAA CCTGGTCGGC TCTCTGCTGA TGGTCGCCAT TCTGCTCGGC
GCGAATTATG CCGGCATGGC CGGCGGCGCT GTGGGCGATG CCATGATCAA CGTTGCGAAT
TCCAAGATCA GCCTGTCGCC GAGCGCCATC TTCTTCCGCG GCATCATGTG CAACTGGCTC
GTCTGCCTGG CTGTGTGGAT GGGCTTCGCC GGCCGCACGG TCATCGACAA GGTGTTCACC
TCGATCTTCC CGGTCATGGC CTTCGTCGCC TGCGGCTTCG AGCACTGCGT TGCGAACATG
TTCTTCCTGC CCATGGGCAT CGCCGCGCTG AACACGGTGG GCTACACGGG CGAGATCGAC
CCTGCCAAGC TCGACGCCAT CATGCAGACC GTCACCGCTG GCGGCGCCTG CTACAATATC
GCTCTTGCAA CCCTCGGCAA CATCGTGGGC GGCGCAATCC TTGTCGGCAT GATATATTGG
GTTGCCTATC ATAAGAAGGC GTAA
|
|---|
| Protein sequence | MEGISAQDIA ATKPDCRGAA ALFAQAQNVA IGKTKLTPLS TFALAVMAGM LIATGATFML
LVKGDTNLGF AASQLLGGLC FSLGLLCVII AGAELFTGNC LMVCAAADKK ISWGAVLKNW
GIVYVGNLVG SLLMVAILLG ANYAGMAGGA VGDAMINVAN SKISLSPSAI FFRGIMCNWL
VCLAVWMGFA GRTVIDKVFT SIFPVMAFVA CGFEHCVANM FFLPMGIAAL NTVGYTGEID
PAKLDAIMQT VTAGGACYNI ALATLGNIVG GAILVGMIYW VAYHKKA
|
|---|
| |