| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_24910 |
|---|
| Symbol | |
|---|
| ID | 8396379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2756697 |
|---|
| End bp | 2758370 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644987237 |
|---|
| Product | Formate-tetrahydrofolate ligase |
|---|
| Protein accession | YP_003144848 |
|---|
| Protein GI | 257065176 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2759] Formyltetrahydrofolate synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACT GGAAATCCGA TATCGAGATC GCGCAGGAAT GCGAGATGCT GCCCATCGAA
GAGGTGGCGC ACAGGGCCGG CATCGACTGG GCAACCTGTG AGCCGTACGG CCGATACAAG
GCCAAGGTCG ACATTCATTC CTACAAGGAC GTGCCCATGA AGGGCAAGCT GATCCTGGTC
ACGGCCATCA ACCCCACGCC GGCGGGCGAG GGCAAGACCA CCACGAGCGT GGGCCTGCAC
GACGCGCTGT GCAGAATAGG CAAGTCCAGC ATGCTGGCGC TGCGCGAGCC TTCGCTGGGC
CCCGTGTTCG GCGTGAAGGG CGGCGCTGCC GGCGGCGGAT ACGCCCAGGT GGTGCCCATG
GAGGACATCA ACCTGCACTT CACGGGCGAC TTCCACGCCA TCGGTGCGGC GAACAACCTC
ATCGCGGCCA TGCTGGACAA CCACATCAAG CAGGGCAACG CGCTGGACAT CGACCCCAAG
AAGGTCATCT GGCGCCGCTG CGTCGACATG AACGACCGTC AGCTGCGCAA CGTGGTGGAC
GGCCTGGGCG GCCCTGGCGA CGGCGTGGCT CGCGAGGACG GCTTCGACAT CACGGTGGCT
TCCGAGGTCA TGGCGGTATT CTGCCTGGCT ACCGACCTGG CGGACCTCAA TGTGCGCCTC
GGCCGCATGG TCGTGGCCTA CAGCCGCAGC GGCAAGCCGG TCACCGTTTC CGACATTAAA
GCCGAGGGTG CGTGCACGGC GCTTTTGAAG GACGCCATCA AGCCGAACCT GGTGCAGACG
CTCGAGAACA ACCCGGCATT CGTGCACGGC GGCCCCTTCG CCAACATCGC GCACGGCTGC
AATTCCGTGC AGGCGACGAC CACCGCGCTG AAGATGGCCG ACTACGTGGT CACCGAGGCC
GGCTTCGGCG CCGACCTGGG TGCTGAGAAG TTCCTGGACA TCAAGTGCCG CTACGCCGGC
ATCCAGCCCT CCGCCGTGGT CATCGTGGCG ACCGTCCGCG CCCTGAAGTA CAACGGCGGC
GTGGCCAAGG CCGACCTGGG AACCGAGAAT CTCGAAGCCC TGGAGGCCGG CCTGCCCAAC
CTGCTGCAGC ACGTCGGAAA CATCCAGGAC GTCTACGGCC TGCCTGCCGT GGTGGCCATC
AACGCCTTCC CGACGGACAC GCCGGCAGAA CTTGAGCTGG TTCAGGCTAA ATGCAAGGAG
CTCGGTGTGA ACGCCGTGCT GGCAGAGCAC TGGGCCAAGG GCGGCGAAGG TGCCGTGGCG
CTTGCCGAAG AGGTCGTTAG CGCCTGCGAG CAGCCTTCCG ATTTCCGCTT CAGCTACGAC
GTCGAGGACT CCATCGAGGC CAAGATCGAG GCCATCGCGA CCAAAATCTA CCATGCCGAC
GGCGTGGACT ACACCGCCAA CGCGAAGAAG CAGCTGGCCC AGCTCAACGA GCTCGGCTTC
GACAAGCTGC CCATCTGCGT CGCCAAGACC CAGTACTCCT TCACGGACGA CCAGACCAAA
CTGGGTGCGC CGCGCGACTT CCGCATTACG GTGCGCAACC TGAAGATCTC TGCCGGCGCT
GGCTTCATCG TGGCGCTCAC CGGCGAGATC ATGACCATGC CCGGTCTGCC CAAGCGTCCC
GCAGCCGAGC GCATCGACGT GACTCCCGAG GGCAAGATCG TGGGCCTGTT CTAG
|
|---|
| Protein sequence | MSDWKSDIEI AQECEMLPIE EVAHRAGIDW ATCEPYGRYK AKVDIHSYKD VPMKGKLILV
TAINPTPAGE GKTTTSVGLH DALCRIGKSS MLALREPSLG PVFGVKGGAA GGGYAQVVPM
EDINLHFTGD FHAIGAANNL IAAMLDNHIK QGNALDIDPK KVIWRRCVDM NDRQLRNVVD
GLGGPGDGVA REDGFDITVA SEVMAVFCLA TDLADLNVRL GRMVVAYSRS GKPVTVSDIK
AEGACTALLK DAIKPNLVQT LENNPAFVHG GPFANIAHGC NSVQATTTAL KMADYVVTEA
GFGADLGAEK FLDIKCRYAG IQPSAVVIVA TVRALKYNGG VAKADLGTEN LEALEAGLPN
LLQHVGNIQD VYGLPAVVAI NAFPTDTPAE LELVQAKCKE LGVNAVLAEH WAKGGEGAVA
LAEEVVSACE QPSDFRFSYD VEDSIEAKIE AIATKIYHAD GVDYTANAKK QLAQLNELGF
DKLPICVAKT QYSFTDDQTK LGAPRDFRIT VRNLKISAGA GFIVALTGEI MTMPGLPKRP
AAERIDVTPE GKIVGLF
|
|---|
| |