Gene Shel_24900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24900 
Symbol 
ID8396378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2756046 
End bp2756669 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content63% 
IMG OID644987236 
Productmethenyl tetrahydrofolate cyclohydrolase 
Protein accessionYP_003144847 
Protein GI257065175 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3404] Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.910504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA AACTGATGGA AAAGAGCTGC ATCGAGTTCG CCGATGCCCT GGCCGCCAAG 
GTCAGCGTTC CCGGCGGAGG CGGGGCTGCC GCCTACGTCG GCGCGCTCGG CGTGGCGCTG
GGCAGCATGA CCGCCAATTT CACAACGGGC AAGAAAAAGT ACGCCGAATA CGAGGATGAC
ATCCAGCGCA TCCTGGCTGA GGGAGACGTG ATTCGTGCAA GGCTCATCGA GCTGGTGTTC
GAAGACGCCG AGGCGTTCGA GCCCCTGTCT AAGGCGTACG GCATTCCGAA AGAGGATCCG
ACGCGTGGTG AGGTGCTCGA GGCCGCCACG AAGAACGCCC TGGCGGCTCC GCTTGAGATG
ATGCGCCAGA TCGCACGGGC CATCGAGCTG CTCGAGGAGC TCGATGTGAA AGGCTCCAGG
ATGCTGATCA GCGACGTCGC CTGCGGTGCC GTCATGAGTG CCGCCGCGAT GCGAGCCGCC
GCCCTCAACG TGTTCATCAA CACCAAGAGT CTGCTCGACC GCGACTTCGC CGCGCAGGTG
GAGGCCGAGG CCGACGAACT TCTTGCCTAT GTGCCGCGCG CCAAGTCGGT TGCGGACGAA
ATCACCGATT CCATCAGGGG GTAA
 
Protein sequence
MAEKLMEKSC IEFADALAAK VSVPGGGGAA AYVGALGVAL GSMTANFTTG KKKYAEYEDD 
IQRILAEGDV IRARLIELVF EDAEAFEPLS KAYGIPKEDP TRGEVLEAAT KNALAAPLEM
MRQIARAIEL LEELDVKGSR MLISDVACGA VMSAAAMRAA ALNVFINTKS LLDRDFAAQV
EAEADELLAY VPRAKSVADE ITDSIRG