Gene Shel_24840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24840 
Symbol 
ID8396372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2749752 
End bp2750594 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content62% 
IMG OID644987230 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003144841 
Protein GI257065169 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC TGCGCAACCT CACCAAAGAC TTCGACGGCT TCACGGCTGT CGACCACCTG 
AGCCTGACCG TCGACACCAA CGAGTTCTTC GGTCTGCTCG GGCCCAACGG CGCAGGCAAG
ACCACGACCA TATCCATGAT TTCGACGGTG CTGCTGCCTA CCGAAGGCCA GGTGCTTATC
GACGGCAAGC CGCTGACCCG CGCCGCTTCC GCCGAGAAGC GCAAGCTCAG CGTCATCACC
CAGGAATACT CGATGCGCCA GGACATGACC ATCGACGAGG TGATGGAGTA CCAGGGCCGT
CTGTATTTCA TGAAACGCAA GGACATCCGC CGCAAAACCG ACGAGCTGCT CGAATTCACG
GGGCTTGCGG ACTGCCGCAA GCGCATCGTG CGCCACCTGT CCGGCGGCAT GAAGCGCAAG
GTCATGATCT GCCGGGCGCT CATGACCGAC CCGGAAATTC TGCTGCTGGA CGAGCCGACG
GCGGGCATGG ACGCGCTGGC GCGCCGTCAG ATGTGGAATC TTCTGCGGCA GCTCCATCGC
GCCAACAACC TGACCATCAT CCTGACCACG CACTACATCG ACGAGGCCCA ATCGCTGTGC
AACCGCGTGG CGCTGCTGGA TTCGGGCAAG CTCGACACGG TGGATACGCC CCAGAACCTC
ATCGAGGAGC TGGGCGCCTT CGCCGTTGAT GAAGTGACCG ACGACCGTGT AGTCAGCACA
TATTATCGCC GGCGGGCCGA TGCCATCGCG CATCTCGAAG GGCTCGGCGA CGATGCGACG
CTGCGCAACA CCACGTTGGA AGACGTTTTC GTAGAAAGGG TCGGGAAGCG CCTCGGCAAC
TAG
 
Protein sequence
MIELRNLTKD FDGFTAVDHL SLTVDTNEFF GLLGPNGAGK TTTISMISTV LLPTEGQVLI 
DGKPLTRAAS AEKRKLSVIT QEYSMRQDMT IDEVMEYQGR LYFMKRKDIR RKTDELLEFT
GLADCRKRIV RHLSGGMKRK VMICRALMTD PEILLLDEPT AGMDALARRQ MWNLLRQLHR
ANNLTIILTT HYIDEAQSLC NRVALLDSGK LDTVDTPQNL IEELGAFAVD EVTDDRVVST
YYRRRADAIA HLEGLGDDAT LRNTTLEDVF VERVGKRLGN