Gene Shel_24830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24830 
Symbol 
ID8396371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2748995 
End bp2749726 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content59% 
IMG OID644987229 
ProductABC-2 type transporter 
Protein accessionYP_003144840 
Protein GI257065168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATCA TCACGGTGCT ATGGGAGAAA TGGACGGAGT TCAAGCGGGA TTTCTACAAG 
ATCACCGTTG CTGCCGTCAT GTCCCCGCTC ATGTACCTGC TGGTGTTCGG GCTGGGCATC
CAGACCATGT CCCACGGCGA GCCGTACCTC AACTTCCTCA TCCCGGGCGT CGTGGCCATG
TCCACCATGA CGGGCAGCTT CTCGGCCGTG GCGCAGAACA TGAGCGTGCA ACGGCTCTAC
GAGAAGGCCC TTGACCAAGT GATGGTGTCG CCCACGCCGC TGTGGCAGTT CATTTTGGGC
CAGATCATCG GCGGCAGCCT GCGCGGCCTG TATGCGGGCG CCATCATTTT GCTGATCACC
ACGCCGGTGC GAACCACGCT CGTGTTCAAC GGTGTGTCGA TCCTGATTAT GTTCCTGAAC
GGCATGGTCT TCTCGACGCT TGCGCTCGTG CTGTCGTTTC TGGCCAAAAG CTACACGGAC
GCGCCACGGT TCAACAGCTA CATCATCTTC CCCATGTCGT TCCTCTGCAA CACGTTCTTC
TCCACCGAGC AGATGCCCCA CGGCTTCCGC GAGGTGGTGT CAGCCTTGCC GTTGTCGCAG
GCCAGCGACA TGATTCGTTC GGTTTCCGCA GGCGGCGACC CAGGCTGGGT CGGTTTTGCC
GTGCTTCTGG CGTACCTGGC GGTGTTCTCG CTGCTGTCGT TCGCGTTCAT TTACAAGAAG
AAGAACCTGT AG
 
Protein sequence
MGIITVLWEK WTEFKRDFYK ITVAAVMSPL MYLLVFGLGI QTMSHGEPYL NFLIPGVVAM 
STMTGSFSAV AQNMSVQRLY EKALDQVMVS PTPLWQFILG QIIGGSLRGL YAGAIILLIT
TPVRTTLVFN GVSILIMFLN GMVFSTLALV LSFLAKSYTD APRFNSYIIF PMSFLCNTFF
STEQMPHGFR EVVSALPLSQ ASDMIRSVSA GGDPGWVGFA VLLAYLAVFS LLSFAFIYKK
KNL