| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_24760 |
|---|
| Symbol | |
|---|
| ID | 8396364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2741230 |
|---|
| End bp | 2741919 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644987222 |
|---|
| Product | conserved protein of DIM6/NTAB family |
|---|
| Protein accession | YP_003144833 |
|---|
| Protein GI | 257065161 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCA AAGCATTCCG TACGCTGAAT TACGGCCTGT ACATCATAAC CGCCAAGAAC
GACGAGCTTC GCGCAGGCTG CGTGGTAAAC ACGTTTGCGC AGGTCACATC GAAGCCTGCT
CAGGTGAGCG TGGCCATCAA CAAAGAGAAC GTCACCTGCG GCGTGGTGCA GGACTCAGGC
GCATTCGAGG CAAGCGTGCT GACCGAAAGC GCGACCATGG AACTGATCGG CCGCTTCGGA
TTCCGTACCA GCACCGAGCT CGACAAGTTC GCCGACACGC AGTATGCCGT GGATGAACTG
GGCATTCCTT ATGTGACCGA GCATGCGGCG GCGCATTTCT GCGCGAAGGT GGTCAACCGG
ATCGACCTGG GTTCCCACAT CCTGTTCATC GGCGAAGTGG TGGATGCCGA GGTGCTGTCC
GGCGATGCGG CCATGACCTA TGCCTATTAC CACAAGGTCA AGGGCGGCAA GACTCCGCCG
AAGGCCTCCA GCTACGAGCA GCCCGAAGAA GCGACCGAAT CGGCCGAGGC TGCGGCTCCG
GCCGCCGAGC CCGCCGCGAC CGAAGGCGTC CGCTACGGAT GGAAGTGCCT GGCCTGCGGC
TATGTGGTCG AAATGGACGA GCTGCCCGAC GACTACACCT GCCCGATCTG CATGGTGGGC
AAGGAGATGT TCAAACGCAT CGAGCTGTAA
|
|---|
| Protein sequence | MDTKAFRTLN YGLYIITAKN DELRAGCVVN TFAQVTSKPA QVSVAINKEN VTCGVVQDSG
AFEASVLTES ATMELIGRFG FRTSTELDKF ADTQYAVDEL GIPYVTEHAA AHFCAKVVNR
IDLGSHILFI GEVVDAEVLS GDAAMTYAYY HKVKGGKTPP KASSYEQPEE ATESAEAAAP
AAEPAATEGV RYGWKCLACG YVVEMDELPD DYTCPICMVG KEMFKRIEL
|
|---|
| |