Gene Shel_24640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24640 
Symbol 
ID8396352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2730507 
End bp2732318 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content64% 
IMG OID644987210 
Productphenylacetaldehyde:ferredoxin oxidoreductase 
Protein accessionYP_003144821 
Protein GI257065149 
COG category[C] Energy production and conversion 
COG ID[COG2414] Aldehyde:ferredoxin oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGCG GATACGGATG GATCGGAACA ATCCTTCGCG TCAACCTGAC CGAAGGCACC 
ATCAAAAAAG AGCCGCTGAA CATGCAGGAT GCCAACGATT ACGTCGGCGC CCGCGGCTTG
GGAACCAAGT ACTACTGCAA CGAGGTCGAT CCGAAAATCG ACCCCCTGTC GCCTGAGAAC
AAGCTCATCT TCATGACCGG CCCGCTCACC GGCACGGCCG CCTGCTCCGC CGGCCGTTAC
GAGGTCGTCT CCAAGGCCCC GCTGACCGGC ATCATCGGCG CCGCCAACTC CGGCGGCCAC
TTCGGCCCCG AGCTGAAGTA CGCCGGCTAC GACGGCATCA TCTTCGAAGG CAAGGCCGAC
CATCCGGTCT ACCTGCACAT CGACGATGAA CTGGTCGAAC TGCTCGACGC CAGCGATCTG
TGGGGCCAGG GCGTGCACCC GGTCACCGAT GCACTGGAGG CCAAGCACGG CAAGGTCCGC
GTGGCCACCA TCGGCAGGCC GGGCGAACGG CAGATGCTCT ATGCGGCCAT CATGAACGAC
AAGAACCGCG CCGCCGGCCG TGGCGGCATG GGTGCCGTCA TGGGCTCCAA GAACCTGAAG
GCCGTCGTCG TGCGCGGCAC GGGCGGCGTG AAGGTCGCCC GCCCCGAGAA GTTCATGGAG
GAAGCCACTA AGGCCCGCAC CATGCTTCGC GAACATCCCG TCACCGGCGC CGGCCTGGCA
GGCTACGGCA CGGAAATCCT GGTGAACATC GTCAACGAGG TCGGCGGTCT GCCGCTGCGC
AATGCCCGCG ACGGTGCCTT CTGGGACAAG GCCGACGACA CCTCCGGCGA GCGCCTGGTG
GAAACCCACC TGATCAAGAA CCAGGGCTGC TTCGGCTGCA CCATCGCCTG CGGCCGCGTG
ACCAAGATCG AAGGCAAGGG CGACCTTGAC GGCTTCGGCG AAGGCCCCGA GTACGAAGCC
GGTTGGTCCT ACGGCGCAGC CTGCGGCGTG AACGACATCT CGGCCATCGT CAAGGCGAAC
TTCATCTGCA ACGAGGAAGG CATGGACCCC ATCACCTTGG GCTCCACCGT CGCCTGCGCC
ATGGAGCTCT TCGAAATGGG CGCCATCCCC GAGTCCGACA TCGGGTTCCC GCTGCGCTTC
GGCGATGCGG AAGCCATGGT CAAGCTCACC CAGATGTGCG CTGACGGCGA AGGCTTCGGC
AACGTCATCG GGCTGGGCTC CTATCGTCTG GCCGAAAAAT ACGGCCACCC CGAGCTTTCC
ATGTCCACCA AGAAGCAGGA AATGCCGGCT TACGACGGCC GTGCCATCCA GGGCATCGGC
CTTGAGTACG CCACTTCCAA CCGCGGCGGC TGCCATGTGC GCGGCTACAT GATCGCCCCC
GAGGTGCTGG GCATCCCTGT GAAGATGGAT CCGCAGGTCA CCGAAGGCAA GGGTGCCATG
CTCAAGACCT TCCAGGACTT GACGGCGCTC TGCGACTCCA CGGGCATCTG CCTGTTCACC
ACCTTCGGCA TCGGTCTGCC GGAAATTGCC GGCCAGTACC GCGAGGCCGT GGGTTCGGAC
GAAACCGACG AGGAGATTCT GCTGAAGGGC GAGCGCATCT GGAACCTTGA AAAGCGCTTC
AACATCGAAG CCGGCGTGGA GAAGGACACG CTGCCGCCGC GTCTGCTGCG CGAAGCGCTG
CCCACCGGTC CCGCGAAGGG CAAGGTCAAC GAGCTCCAGA CCATGCTGGC CGACTACTAT
GCGGCACGCA ACTGGACGGC TGACGGCATC CCCACGCAGG AGAAGCTCGA CGAACTGAGC
CTGACGTACT AG
 
Protein sequence
MTRGYGWIGT ILRVNLTEGT IKKEPLNMQD ANDYVGARGL GTKYYCNEVD PKIDPLSPEN 
KLIFMTGPLT GTAACSAGRY EVVSKAPLTG IIGAANSGGH FGPELKYAGY DGIIFEGKAD
HPVYLHIDDE LVELLDASDL WGQGVHPVTD ALEAKHGKVR VATIGRPGER QMLYAAIMND
KNRAAGRGGM GAVMGSKNLK AVVVRGTGGV KVARPEKFME EATKARTMLR EHPVTGAGLA
GYGTEILVNI VNEVGGLPLR NARDGAFWDK ADDTSGERLV ETHLIKNQGC FGCTIACGRV
TKIEGKGDLD GFGEGPEYEA GWSYGAACGV NDISAIVKAN FICNEEGMDP ITLGSTVACA
MELFEMGAIP ESDIGFPLRF GDAEAMVKLT QMCADGEGFG NVIGLGSYRL AEKYGHPELS
MSTKKQEMPA YDGRAIQGIG LEYATSNRGG CHVRGYMIAP EVLGIPVKMD PQVTEGKGAM
LKTFQDLTAL CDSTGICLFT TFGIGLPEIA GQYREAVGSD ETDEEILLKG ERIWNLEKRF
NIEAGVEKDT LPPRLLREAL PTGPAKGKVN ELQTMLADYY AARNWTADGI PTQEKLDELS
LTY