Gene Shel_24630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24630 
Symbol 
ID8396351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2730031 
End bp2730507 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content59% 
IMG OID644987209 
ProductFe-S-cluster-containing hydrogenase subunit 
Protein accessionYP_003144820 
Protein GI257065148 
COG category[C] Energy production and conversion 
COG ID[COG1142] Fe-S-cluster-containing hydrogenase components 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.538569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAC AATTAGTCGT GGATCCCAAG AAGTGCGTAA GCTGCCGCAC GTGCGAGCTG 
GTCTGCTCGT TCAAGCACAA CGAGGAATTC AATCCACGCC TGTCCAATGT GACCGTCTTC
CATTACGAAG ATGCAGCCAT CACCGTGCCG ATCATGTGCA TGCAGTGCGA CGAAGCCTGC
TGCGCGGCCA TCTGCCCCAC CGGAGCGCTC AAACGCAACG CAGATGGCGT GATCACCCAC
AATGCCGACA AGTGCATCGT CTGCAAGATG TGCGTGAGCG CCTGCCCGCT GGGCAACATC
TCCTACTCGG TCGCCAAGAA GAAGGTTTTC AAGTGCGACC TCTGCGACGG GGAAACCTGG
TGCGCCGTGC ACTGCCCCAC CGGCGCCATC AGCGTCATCG ACCCTGATGA GGCCCTCGAT
AAGAAGAAGC TCGCCGCCGA CAAGCTCAAG GCGGCCGTCG AGGAGGTGTC TGCATAA
 
Protein sequence
MAKQLVVDPK KCVSCRTCEL VCSFKHNEEF NPRLSNVTVF HYEDAAITVP IMCMQCDEAC 
CAAICPTGAL KRNADGVITH NADKCIVCKM CVSACPLGNI SYSVAKKKVF KCDLCDGETW
CAVHCPTGAI SVIDPDEALD KKKLAADKLK AAVEEVSA