Gene Shel_24580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24580 
Symbol 
ID8396346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2723936 
End bp2724832 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content63% 
IMG OID644987204 
ProductDMSO reductase anchor subunit 
Protein accessionYP_003144815 
Protein GI257065143 
COG category[R] General function prediction only 
COG ID[COG3302] DMSO reductase anchor subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTTG GACTTCATAC CGCACTGCAA GAGCTGTCGC TCATCCTGTT CACCACCCTC 
ACGCCTGCGG GGGCCTTCGC CTGCATGCTG CTCGCATTGC TGCAGATGGG AAGCGCGCCC
AGCGATGCGC AGCGCACCCG CTTGCGGCAC ATGATGGGAC TTCCCCTTGT GGTGTCGACG
GTGGGCATCA TCGCCTCGTC GACGCACCTG GGCACGCCCG CCAACGCGCT CTACGTGATC
ACGGGAATCG GGCGCTCGCC GCTGTCCAAC GAGGTCGCCT GCGTGCTTGT GTTCCTGGTC
GCGACGGGCG CGTTCTGGCT GTATTCCTTC TCCATCAAGC CGAATGCGAT CTTGATGAAA
GCCCTGGGGA CGGCCGTCGC GGTCTTGGGG CTCGTGTGCG TGGCAGGCAT CTCGTTTGCC
TACGACCAGG AAACCATCGT CACCTGGACA ACTTGGATGA CCCCCGTTGG CACCGCCCTT
GGCGGCTTGG CCTGCGGAAT TCCTCTGTTC CTGCTGACGG CGCACCTGGC ACAGGCCTTC
GACGCGATCG AGCGTATGAA AAAGCCCCTG CTCGGCATCG GTATAACGGC CTTTGCATCC
AACACCGCCT GCGCCATTGC GCAGTACGCG GCCGTTTCGG GCATGTCCAA CGAATTCCTG
AGCGTTTCCG AGCTGGCGCC TGCCTACCCG GCGTTCATCG CGACATACGT GCTCTGCACT
ACCTGCGCCT GTTATTTGTG CGGCATGACG CTTCTGACCA AGGGGGCTGT AGACGAGGTA
GCCGCCCGCA CGCGCGGCAG GCGGCTGCTG CTTGCGACAA TCCTCGCCGC GCTCGGGTTT
TTCTCCCTGC GGTTCGTCTT TTACATGGTC CACATGACCG TCGGCATCAG CTTGTAG
 
Protein sequence
MGLGLHTALQ ELSLILFTTL TPAGAFACML LALLQMGSAP SDAQRTRLRH MMGLPLVVST 
VGIIASSTHL GTPANALYVI TGIGRSPLSN EVACVLVFLV ATGAFWLYSF SIKPNAILMK
ALGTAVAVLG LVCVAGISFA YDQETIVTWT TWMTPVGTAL GGLACGIPLF LLTAHLAQAF
DAIERMKKPL LGIGITAFAS NTACAIAQYA AVSGMSNEFL SVSELAPAYP AFIATYVLCT
TCACYLCGMT LLTKGAVDEV AARTRGRRLL LATILAALGF FSLRFVFYMV HMTVGISL