| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_24560 |
|---|
| Symbol | |
|---|
| ID | 8396344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 2722546 |
|---|
| End bp | 2723175 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644987202 |
|---|
| Product | DMSO reductase, iron-sulfur subunit |
|---|
| Protein accession | YP_003144813 |
|---|
| Protein GI | 257065141 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | [TIGR02951] DMSO reductase, iron-sulfur subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATACG GTTTCTATTT CGACGGCACG CGCTGCACAG GCTGCAAAAC CTGCGTCCTG
GCGTGCAAGG ATAACAAGAA TCTCACCTCC GAACAGGCAT TCCGCCAGGT GTATGAGTTC
GAAGGCGCCG ATGGCTTCAC GGCGGACGAC GCCGGATGCT GGACCGTCGG CAGCTTCACC
TACTACGTGT CCAGCGCCTG CAACCATTGC GCGACCCCGG CGTGCGTCGA GGCATGCCCC
GTGGGCACCA TGACGAAGCA CGAGGACACG GGCCTGGTCT ACAACGACCC CGAAACCTGC
ATCGGCTGCG GCAGCTGCGT GAATGCATGC CCCTACGGCG CACCCCAGGT AGACACGGAA
ATCCAGAAGT CCATCAAGTG CGACGGCTGC CACGCGCGCG TCGAAGCCGG CGAAATGCCG
ATCTGCGTGG CCGCCTGCCC GCAGCGCGCC CTGGAGTTCG GCGACATCGA GGAGCTTCGC
GCCAAGTACG GCGACACTGC GGCCATCGCT CCGCTTCCCG ACCCGTCACA GACCACGCCC
AGCGTGTGCA TCAACCCGCC GGTCTGCTTT GTGGACTGGT CCGAGGCCGA CAAGGGTACG
GTCGTGAACG CCATGGAGCT TCGCGCCTAA
|
|---|
| Protein sequence | MQYGFYFDGT RCTGCKTCVL ACKDNKNLTS EQAFRQVYEF EGADGFTADD AGCWTVGSFT
YYVSSACNHC ATPACVEACP VGTMTKHEDT GLVYNDPETC IGCGSCVNAC PYGAPQVDTE
IQKSIKCDGC HARVEAGEMP ICVAACPQRA LEFGDIEELR AKYGDTAAIA PLPDPSQTTP
SVCINPPVCF VDWSEADKGT VVNAMELRA
|
|---|
| |