Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_24550 |
Symbol | |
ID | 8396343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2720090 |
End bp | 2722534 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644987201 |
Product | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
Protein accession | YP_003144812 |
Protein GI | 257065140 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACG AAAAAGACAC CGCCATGTCG CGGAGGACCT TCGTTAAGGG AGGAACCCTC GCAGGGCTCG CTTTCGCAGG CAGCTCCGCA CTGTTCGCTT GCTCTCCCAG CGCGAGCGAA CCGGCACAGG ACGAGGCCGA AACCGGCGAA GCGCCCGTCG AAGGTGCCGA GGAGACGGTC ACCTGGTCCC ACTGCCACGT CAATTGCGGC GGCGCTTGCC CGCTGCGCCT GCATGTGGTC GACGACGAGA TCGCCTGGGT CGACAATGAC ACCAGCGGCA GCCCCGAGTT CGGCGCCTAC CAGCTGCGCC CCTGCCTGCG CGGCCGCTCC ATCCGTCGTT GGATCAACGG CGAGGACCGT CTGAACTACC CCATGAAGCG CGTCGAGGGC ACCGCCCGCG GCGAGGGCAA GTACGAGCAG ATCAGCTGGG ACGAGGCTCT GGACATCATC GCCAGCGAAT TCACCCGCGT GAAGGAAACC TACGGCAACG AGGCCATCTT CATCCAGGAG TGCTCCGGCG TCGAGCAGAA CGTCATGATG AACAGCCCGT TCTTCCGTCT GTTCAACCTG TTGGGCGGCG AAACCAAACG TTACGGCAAC TACTCCAACG CCGGCATCAG CTTCGGCGCT TTGCCTTACA CCTACGGCGG CGGCTGGGCG GCACGTCCGT TCCACTCCAT CGCCGACGGC GAGCTGGTGG TCATGTTCGG CAACGCCCCT GCAGACACCC GCATGGCGGG CGACGGCGCA GGCTACGACC TGAACGTCAT GCGCGAGCAG AAGGGTGCGA AGATCATCGT CATCGACCCG CGCCGTTCCG ACATCGCCGC CAATCAGGAT GTCGAATGGA TTCCGATCAT GCCCGGCACC GATGCCGCGC TGGTCGCAGG CGTCGCCCAT GAGCTGATCG CCGCCGACCT TGTCGACCTG GACTTCCTGC ACACCTACTG CGTGGGCTAC GACGAGGAGA CGCTGCCCGA AGGCGCCCCT GAGAACAGCT CCTACTACGC CTACATCATG GGCACCGGCT ACGACATGGT GGAGAAAACC CCTGCTTGGG CCGCCGCCAT CACGAAGGTT CCCGAGGCCC GCATCATCGA GCTGGCTCAC CAGATCGGCG AGGCCAAGCC CTGCTTCATC TGCCAGGGTT GGGGCCCGCA GCGCCGCACC AACGGCGACT CCGCATCCCG CGCCATCATG CTGCTGCCCC AGCTGGTCGG CCAGGTGGGC AAGCCCAACA CCAACAGCGG CGCCCGCGAA GGCAACGGTG GCTTCTGGAT CGACACCTTC CCCGAGAGAG ACAACCCCGT ATCCGCCCGC TTCCCCAACT TCCTGTGGCC CGAAGCCATC GACCACGGTC ACGAGATGAC CGCCACCAAC GCCGGCATCA TCGACGGCGA CGGCCTGAAG AGCGACATCA AGTTCCTGGT CAACTACGGC AACAACATGA TGGCCAACCA GAACGCCGAT ATCAACACCA CCACCGACAT CCTGAAGGAC GAAAGCAAGT GCGAGTTCAT CCTGCAGTAC GACGTGGTGT GGAGTGATTC GTGCAACTGG GCCGACATCG TGCTGCCCGA CCTGACCCCG CAGGAAACCT GGACCTGGTC CGTGCAGGGC GAATGCAACG ATTCCCTGGG CGTGTGGTTC GGCCGTCCTT CCACCAGCCA GAAGTTCGAG CGTCGCGAGG TATACGAAGT CTGCGCCGAC CTGGCCGAGC GTCTGGGCGT CTACGACGAG TTCACCGACG GCGGCAAGAC CCGCGAGGAC TGGTGCCGCG AGCTGTACGA AGCCTGGGCC GCCGACAACC CGAACGCCCC GCAGACCTTT GACGAGGGCC TGGAAATGGG CATCTACAAG GAAGAGATCG AATGGTCCGA CGGCGGCACC GATCCCTTCA TCGAGGACCC CGAAGCGAAC CCCCTGGAAA CGGCCACCGG CAAGATCCAG GTGTACTCCC CCGAACTGGC GGAAATGGCC GAAACCTGGG AACTTGAAGA GGGCGAGTCC ATCTGCCCGA TTCCCGCATA CCTGCCCGGA TTCGAGAACG CCGAAGGCGT GACCGACGAG TTCCCGCTGT GCATGGTAGG CTACCACACC AAGGCGCACA CGCATTCCAG CTACGCGAAC AACATGATCA TCCAGGACGC CCATCATCAC AACGCCTGGA TCAACCCGAT CGACGCCGAA GCCCGCGGCA TTGCCAACGG CGACGCGGTG CGCGTCAAGA GCGCCCATGG CGAGATCGAG ATCGAGGCCC GCGTGACGAA CCGCATCATC CCTGGCTGCG TGGCCATTCC GCAGGGCATG TGGCATAAGG CCGACATGCA GGGCGACCGC ATCGACTTCG GCGGCTGCAT CAACACGCTT GCCAGCCGTC GCGCAACGCC GGTCGGCAAG GCAGTTGGCG CACACAGCGC CGTCATCGAA GTCACGAAGG CGTAA
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Protein sequence | MTNEKDTAMS RRTFVKGGTL AGLAFAGSSA LFACSPSASE PAQDEAETGE APVEGAEETV TWSHCHVNCG GACPLRLHVV DDEIAWVDND TSGSPEFGAY QLRPCLRGRS IRRWINGEDR LNYPMKRVEG TARGEGKYEQ ISWDEALDII ASEFTRVKET YGNEAIFIQE CSGVEQNVMM NSPFFRLFNL LGGETKRYGN YSNAGISFGA LPYTYGGGWA ARPFHSIADG ELVVMFGNAP ADTRMAGDGA GYDLNVMREQ KGAKIIVIDP RRSDIAANQD VEWIPIMPGT DAALVAGVAH ELIAADLVDL DFLHTYCVGY DEETLPEGAP ENSSYYAYIM GTGYDMVEKT PAWAAAITKV PEARIIELAH QIGEAKPCFI CQGWGPQRRT NGDSASRAIM LLPQLVGQVG KPNTNSGARE GNGGFWIDTF PERDNPVSAR FPNFLWPEAI DHGHEMTATN AGIIDGDGLK SDIKFLVNYG NNMMANQNAD INTTTDILKD ESKCEFILQY DVVWSDSCNW ADIVLPDLTP QETWTWSVQG ECNDSLGVWF GRPSTSQKFE RREVYEVCAD LAERLGVYDE FTDGGKTRED WCRELYEAWA ADNPNAPQTF DEGLEMGIYK EEIEWSDGGT DPFIEDPEAN PLETATGKIQ VYSPELAEMA ETWELEEGES ICPIPAYLPG FENAEGVTDE FPLCMVGYHT KAHTHSSYAN NMIIQDAHHH NAWINPIDAE ARGIANGDAV RVKSAHGEIE IEARVTNRII PGCVAIPQGM WHKADMQGDR IDFGGCINTL ASRRATPVGK AVGAHSAVIE VTKA
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