Gene Shel_24530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24530 
Symbol 
ID8396341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2717350 
End bp2718231 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content61% 
IMG OID644987199 
ProductFe-S oxidoreductase 
Protein accessionYP_003144810 
Protein GI257065138 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTTTA CCGAACCTGT ATACCGCAAC CCCTACTGGC CCACATGGCC GCTGCTTGAG 
ATCACGGCCG GCTGCACCCA CAACAAGTGC AAGTTCTGCA CCATGTACAA GGGGGTCCGC
TTCGACGTGC GTTCGATTGA GGACATCGAG GCTGACCTGG CGGAACTGCG CACGATGGTG
CCCCACGCCC GCACCATCCA GCTGCTGAGC GGCAACCCTT TGGCCCTGCC CTACAGCCGT
CTGAAGCCCA TCCTGGAGAA AATCAACGAG TATCTGCCCG ACATGGAATA CGTTTACACG
GCCGGACGCG TAACCGACCT GCGCAACAAG ACCGTCGAGC AGCTTCGCGA GCTGAAAGAG
CTCGGCCTTC GCGAGGTCTC GCTGGGTGTC GAAAGCGGCG ACGACTGGAC CTTGGATCGC
GTCAACAAGG GCTACCACGC CGAGGACATC ATCGAGCAGT GCGGCAAACT CACCGAAGCC
GGGATCGACT TCTGGATGTC GTTCCTGAAC GGCGTGGCCG GCCGTTCGCA CAGCCGCGAC
CACGCTATCC ATTCGGCTGA AATCTTCAGC CAGTGCAAAC CCATGCTCGT GGGCACGGGC
GGCCTTACGC TGTTCCCCGG CACGCCGCTT TTGGAAGAAG CGCAGGCTGG CGAGTTCGAC
CCGCTGAGCG AGCGCGAGAT GCTCGAGGAG CTGTTGCTGT TCGTGGAGAA TCTGACCTGC
GACTGCAAAT TCATCACGCA CCACACCATC GGCGGCGACA ACCTTTCGGG TCCGAACTTC
CTTGCACGCA AGGACGACAT CATCTCGTCT CTGCGCGACG AGATCGACCA TGGCGACCTG
GAAACCTATG CCGCCATCAG GAGGAACAAG GTCACGCTGT AA
 
Protein sequence
MHFTEPVYRN PYWPTWPLLE ITAGCTHNKC KFCTMYKGVR FDVRSIEDIE ADLAELRTMV 
PHARTIQLLS GNPLALPYSR LKPILEKINE YLPDMEYVYT AGRVTDLRNK TVEQLRELKE
LGLREVSLGV ESGDDWTLDR VNKGYHAEDI IEQCGKLTEA GIDFWMSFLN GVAGRSHSRD
HAIHSAEIFS QCKPMLVGTG GLTLFPGTPL LEEAQAGEFD PLSEREMLEE LLLFVENLTC
DCKFITHHTI GGDNLSGPNF LARKDDIISS LRDEIDHGDL ETYAAIRRNK VTL