Gene Shel_24500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24500 
Symbol 
ID8396338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2715032 
End bp2715640 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content56% 
IMG OID644987196 
Producttranscriptional regulator 
Protein accessionYP_003144807 
Protein GI257065135 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA GCGGTGACAT TATGTATAAA ACCTCTCATG ACCTGCGTTT TGTAAAAAAC 
CGTACCGCGT TGCGCCGTGC CTATATCGAC CTGGTCCAGG AGAAGGGTTC GTCCAGCGTG
ACCGTGAAGG AGCTAGCTCA GCGGGCGAAC GTGAACCGCA TGACGTTCTA TGCGCATTAC
GATACGGTCG ATGACATCCT TTGCGAATAC GTGGACGAGA TGACCTCGGC CATTCTGGAA
AACAGCTCCA AATCAGGCGA AACCGATGTT GCGGGATTGT TCGAAGCGGC CACCGAGCAG
ATGCGCCAGG AGATCGGATT TTTCAGGCTC GTGGCGAAAG AAGACGGGTT CGAGCTATTC
AGAGGTCGAT TCCGCAACGC GTTCCGCCAT ATTTTCAAGG AGGAGCTGAT GCATGTTCCG
GGCTTGTGTG GAACATGCCT GGAGCTGACG GCCGACATGA TCGCATCGGG CGTCACCTAC
GCCTATTTCG GCTGGCTGGC GGGGGAGTAC GGGGACCTTC CCTTGGACGA GCTGGTGTCG
CATTTCGAGG GCATGTACGG CGGCCTGCTT GGCGTTTATC CTGATGGGCA GAGGGGGAGT
GGCCGGTAG
 
Protein sequence
MKNSGDIMYK TSHDLRFVKN RTALRRAYID LVQEKGSSSV TVKELAQRAN VNRMTFYAHY 
DTVDDILCEY VDEMTSAILE NSSKSGETDV AGLFEAATEQ MRQEIGFFRL VAKEDGFELF
RGRFRNAFRH IFKEELMHVP GLCGTCLELT ADMIASGVTY AYFGWLAGEY GDLPLDELVS
HFEGMYGGLL GVYPDGQRGS GR