Gene Shel_24450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24450 
Symbol 
ID8396333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand- 
Start bp2709995 
End bp2711047 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content54% 
IMG OID644987191 
ProductABC-type Fe3+-siderophore transport system, permease component 
Protein accessionYP_003144802 
Protein GI257065130 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTC AAAGCAGCAT AGATAACTCT TTCGGCCGCT CGGTGAAACG GCGCCGCACA 
TTCGCGGTGT TCGCCTTTCT CGGGGTACTT TTGGTGGCGT TGGCGGTGAT GAACCTTTGC 
ATTGGAACGC TGAAGGTTTC CCCTGGTGAC TTGGTTGCAG TTCTTTTCGG TCACGACGCG 
GAGAGCGTCG GATATCAGGT GATTTGGGAT ATTCGCCTGC CTCGGCTTAT TGCTGCCGCT 
TTGCTTGGCG GCGCTTTGGC TTTGGCGGGC TTTCTGCTGC AGACATTTTT CAACAATCCT 
ATTGCCGGGC CGTACATCCT CGGTATTTCA TCGGGTGCAA AGCTCGCGGT TGCGGTGATG 
ATGATTGTGG TCATCGGCTC GTCGAGAACC ATGCCCTCTT GGTTGCTTGT GATTTCAGCT 
TTCGTGGGAT CGATGGTCGC CATGTTGTTC GTCTTGTCTG TATCGAGGCG AATAGAATCG 
ATGGCCATGC TTATTGTGGC AGGCGTAATG GTGGGGTACA TCTGTTCAGC GGCAACCGAT 
TTCCTCATCA CGTTCGCATC GGATGCTAAC ATCGTGAACC TGAAGAACTG GTCGCTCGGA 
AGCTTCTCAG GCGTCAATTG GAGGGATATC GGCATAATTG CCGTGGTCTC TTTGACGGCG 
TCCGCTGCTG TGTTCGCCCT CTCGAAACCG ATAGGCGCTT TCCAACTGGG CGAACAGTAC 
GCACGCAGCA TGGGTGTAAA CATTCGGGTA TTCCGTGTTG CGCTCATAGT CCTGTCGAGT 
TTGCTGGCGG CTTGCGTGAC CGCGTTCGCT GGCCCGATCA GCTTTGTGGG CATTGCCGTA 
CCCCATGTGG TGAAAAGGCT TCTCTCCACA TCGAAGCCAA TTGTCGTTAT CCCAGGCTCG 
TTTCTCGGAG GCGCTATATT CTGCTTGTTC TGCGACTTGA TTGCGCGGAA CATATTCGCT 
CCGACTGAGG TGTCTATCTC AGCCGTAACG GCGATTTTCG GTGCGCCAAT CGTTATTGGC 
ATTCTGTTGC GTCGAGAGAA GGCGAGGAAT TAA
 
Protein sequence
MQRQSSIDNS FGRSVKRRRT FAVFAFLGVL LVALAVMNLC IGTLKVSPGD LVAVLFGHDA 
ESVGYQVIWD IRLPRLIAAA LLGGALALAG FLLQTFFNNP IAGPYILGIS SGAKLAVAVM 
MIVVIGSSRT MPSWLLVISA FVGSMVAMLF VLSVSRRIES MAMLIVAGVM VGYICSAATD 
FLITFASDAN IVNLKNWSLG SFSGVNWRDI GIIAVVSLTA SAAVFALSKP IGAFQLGEQY 
ARSMGVNIRV FRVALIVLSS LLAACVTAFA GPISFVGIAV PHVVKRLLST SKPIVVIPGS 
FLGGAIFCLF CDLIARNIFA PTEVSISAVT AIFGAPIVIG ILLRREKARN