Gene Shel_24440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24440 
Symbol 
ID8396332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2709216 
End bp2709995 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content53% 
IMG OID644987190 
ProductABC-type cobalamin/Fe3+-siderophore transport system, ATPase component 
Protein accessionYP_003144801 
Protein GI257065129 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCA TGCCCTGCTT GCGTACAGAA GGCCTGATTG TCGGTTATGA CGGGAAACCG 
CTGATCAAAG ACGTAAATAT CGACGTTCTG CCTGGTCGCA TTGTCACGCT GATCGGTCCG
AACGGCGCCG GAAAGTCAAC TATTCTGAAA ACCGTAACGG GCTATTTGGA GCCTTTGGGC
GGCGCCGTGT ATCTTTCCGG TAAGCCGCTG AGTGAACTGA CTCCCCATGA ACGGTCGCTG
CAGTTTTCCG TTTTGCTGAC CGAACGGTTG AGAACTGAGC TTCTGACGTG TGCCGACATT
GTTGAAACGG GTCGGTATCC TTATACGGGA CGCTTGGGAA TCCTAACCGA TGAGGACCGT
CGAATCGTGC GCGAATCCAT GGAAATGGTT CATGTTTGGG ATCTTCGCGA CAGGGATTTC
ATGCAAATCA GCGATGGGCA GCGCCAGCGT ATTCTGCTGG CGCGTGCCAT CTGCCAACGC
CCGCAGACCA TCGTATTGGA TGAGCCTACA AATTACTTGG ACATTCGCTA TCAGATTGAT
CTGCTCAACG TTTTACGCCG GCTTGTATCA GCACGAGAGG TCGGTGTAAT CATGTCGCTG
CATGAGCTGC CCCTTGCCCG AAAGGTAAGC GATTTCGTGC TGTGCGCGAA GGGCGACGGC
ATCGTAGCTG CTGGCGCACC TGAAGAGATT TTTGTGCCTG AAGTCATAGA CGACCTCTAC
GGGCTGAAGC CTGGCGTTTA TGATCCAATA TCTGGGCAGA TTCTCCTTGA AGATGAGTAG
 
Protein sequence
MDIMPCLRTE GLIVGYDGKP LIKDVNIDVL PGRIVTLIGP NGAGKSTILK TVTGYLEPLG 
GAVYLSGKPL SELTPHERSL QFSVLLTERL RTELLTCADI VETGRYPYTG RLGILTDEDR
RIVRESMEMV HVWDLRDRDF MQISDGQRQR ILLARAICQR PQTIVLDEPT NYLDIRYQID
LLNVLRRLVS AREVGVIMSL HELPLARKVS DFVLCAKGDG IVAAGAPEEI FVPEVIDDLY
GLKPGVYDPI SGQILLEDE