Gene Shel_24380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24380 
Symbol 
ID8396326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2702241 
End bp2702774 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content60% 
IMG OID644987184 
Producthypothetical protein 
Protein accessionYP_003144795 
Protein GI257065123 
COG category[S] Function unknown 
COG ID[COG3976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGA CTTTGATTCG GTGGATGGCC GCTGCTGTAT CGACAAGCCT CGTGCTTGCA 
GTGGGCCTCT GCGGTTGCGA AAACGGCTAC GAAGGCACTG GCAGCAAGGA CGCGGCCAGC
GCTGAACAAC TGGCAATGCA CACCGACGAT CCTTGGGATG CCCCAATCGA AAAGACCGCC
GACCGCACAG AAAACGACCT GGTCGACGGC GTGTACATTG GCGTGGGCCA TGGCGTGGAC
GGACTTGTCA CCGTCACCAT CCAGGTGGAA GACAACGTCA TCACCGTTCT GGAAACCGCC
CAGGAGGGCG AAACCCAAAG CGTTGGCGGC TGGGAGGCCA TCCGCAACGG CACATATGCC
GAGATGATTG AAGCGGCCCA AGGCAGTGGC TTCGACTCGA TTTCCGGCGC CACCTTCACA
TCGGCCGCCA TTCGCGAGGC CGTCGACGAT GCGCTGGCGC AGGCCGAAAC CGGTGTTGTC
GATCCGTCCA AAACGAGCAT TCATGAAGCC GCTCAGGCAG ATACGGAGGA ATAG
 
Protein sequence
MNKTLIRWMA AAVSTSLVLA VGLCGCENGY EGTGSKDAAS AEQLAMHTDD PWDAPIEKTA 
DRTENDLVDG VYIGVGHGVD GLVTVTIQVE DNVITVLETA QEGETQSVGG WEAIRNGTYA
EMIEAAQGSG FDSISGATFT SAAIREAVDD ALAQAETGVV DPSKTSIHEA AQADTEE