Gene Shel_24330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24330 
Symbol 
ID8396321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2694953 
End bp2695951 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content64% 
IMG OID644987179 
Producthypothetical protein 
Protein accessionYP_003144790 
Protein GI257065118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCC GTACGAACCC GTTCGCGAAG CGGGTCAACG CCCTCGATGA GGGCGATTTC 
GCGCTCTTGC AAGAGGCCGT CGAGACGAGA AGGTGCCGCG AGTCCGTCGG CGTCGGAGAT
TACGACGAGG CTGCCGACGA GTGGAGGCCC CGGCCCCCGT GCCCGAGATG CGGTTCCGGC
GAGACCGTCG GCCGAGGCCG CACGGGTGCC GGCCGCAGGT TCTGGGAATG CCGCGACTGC
GGTCGCAAGT ACACGTCGTT GGCCGGCACG ATATTCGAAT CCTCGAAGAA GCCCCTGTCC
GCATGGGTCC TCTTCATCCG CCTCATGTGC TACAACGTGC AGCTCGACGC TGCGGCGGAG
CTCTGCGGGA TGTCGCACCA GACGGCCTGG GAGTGGCGCC ACCGGGTCAT GAGCACGATA
GACGGCTACC AGGACCGCAT CGTCCTGCGG GACAAGGTCT GGATAGACGA GATGTACGTC
ACGGACTCCG ACCTGAAGGG AGGCCCGGGC TGGAGGCCGA AGAGGGGCCT GAGCAAGGAC
AAGGTCTGCA TAGCGGTCGC GATCGACGTC CACAAGAACG TGGTCGCCGT GCGCTGCGGC
CACGGCAAGC CCTCGGCCAG GCGCATCAAG GACGCGCTGC AGGCCAGCAT CGCCGAGGGC
TCCGAGATCT TCCACGACAT GGAGAAGTCC CACAAGTCGC TGGTGAAGGC CGTGAAGGGC
GTCGACCGGC CCTACAAGGC CGACACGAAG GACCCGGAGT ACCTCGAGAA GATGGCGATG
GTGAACAACC TGTGCTCCTG GATCAGGCGC TACCTGCACG GCTACGTCGG CATGGACGTC
AAGAACCTGC AGTCATATCT GAACTGGTAC GCGTACCTGT TCAGGGTCAA GCGGGCCGAG
GAGAAATGGC CCAAAGTGGA AAGGGTGCTC CGCCATTTGT TCATGGCCGA CGCCACTTTC
CGCAGCTCGC GCAAGCGCGG TCACGCCTAC GTTGGTTGA
 
Protein sequence
MSTRTNPFAK RVNALDEGDF ALLQEAVETR RCRESVGVGD YDEAADEWRP RPPCPRCGSG 
ETVGRGRTGA GRRFWECRDC GRKYTSLAGT IFESSKKPLS AWVLFIRLMC YNVQLDAAAE
LCGMSHQTAW EWRHRVMSTI DGYQDRIVLR DKVWIDEMYV TDSDLKGGPG WRPKRGLSKD
KVCIAVAIDV HKNVVAVRCG HGKPSARRIK DALQASIAEG SEIFHDMEKS HKSLVKAVKG
VDRPYKADTK DPEYLEKMAM VNNLCSWIRR YLHGYVGMDV KNLQSYLNWY AYLFRVKRAE
EKWPKVERVL RHLFMADATF RSSRKRGHAY VG