| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_24320 |
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| Symbol | |
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| ID | 8396320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2693261 |
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| End bp | 2694862 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644987178 |
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| Product | putative collagen-binding protein |
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| Protein accession | YP_003144789 |
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| Protein GI | 257065117 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGA CAAAGAAAAT GATCGCAGGC GTCGTGGTCG CGCTGACCAT GGCTCTGTGC
CTGGCCGCCA CGGCATTCGC CGCGACGACC CAGGACATGT CCATCACGAA TGCCAAGGAT
GGGAGCACCT ATAAGGCATT CCAAGTCATG ACCGCCGAGC AGGTGGGTAC CGACAACGAC
GGCAAGGCGC TGTATGCCTA CACCGTGTCT GATGATTTCG CAGGCTTCTT CAAGGACGGC
GCCAACGGCT ACACGCTGGA CGACCAGAAC CAGATCCTGA AGGATGGCAA GGTTGTCGCA
GGTGACGATC GTTGGACGAA CACCAACGCC ACCGACGCCG CTGCCCTGGC TTCCGCTCTT
GAGAAGTATG CCGTTGCCAA GGGCATCAAG GGTACTGCCG TGAGCTCCGC CGCGGCAGCT
CTGCCCGAGG GCTTCTACGT TGTGGCCGAA ACCGTCTCTA CCGAGGACAG CACCGACGAC
TCTGCAGCCA AGGAAATCGC CACCAAACCC ATCCTGGTGA ACCTGACCGG CGCTGCTGCC
GAAATCACCC TTAAGGACGA CACCACCACG CTGGAGAAGA AGATCGTCGA AGGCGGCAAG
CTGGTCGACA CCAACAACGT GAACATCGGC GACGACGTCG ACTACCAGAT CAACACCAAG
ATCCCGACCT ACGAGGCGAA CGTCGACACG ACGAAGCTCA TGTTCAAGCT GACCGATACC
TTCTCCGAGG GTCTGACCTA CAACGACGAC ATCGCAATCG AAGGTTTCAC CAAGGACACC
GACTACACGG CAACCCTTGA CGGCCAGGTC CTGACCATCG AATTCACCCC TGCCGCCATC
GCCGCCCACC AGGGCGAAGC CGTGAAGGCC ACCTACTCCG CCAAGCTCAA CGACAAGGCC
AAGGTCGACA GCACCGAAGG CAACCCCAAC ACCGTCAAGC TTGAGTACAC CAACAACACC
AACGAAGAGG AAAGCCACAA GACCCTGAAC GACGAGACCA AGACCTTCAC CTATGGCTTC
AACGTCCATA AGGTCGACAA GGTTGCTCCT AGCACGGGTC TGGCCGATGC CAAGTTCGAG
CTGAAGGACA AAGACGGCAA CGTCGTCAAG TTCGACTACG ACAAGGCAAC CGACACCTAC
ACCGTTAACC CCAACGGCAC CGTTACCGAG ATCGTGTCTG TCGGCGGCGA GGGCCTGGCA
ACTGTGAAGG GTCTGGACGA GGGCACCTAT ACGCTCACTG AGACTCAGGC TCCTGACGAG
TACACCAAGC TTTCCGAGCC CGTGACCGTT ACCATCGCTG ACAAGAAGGA TGCCAACGGC
GACAACACCG GCGTGGCTGT TCTGACCGCT GGCGGTGCCG GCAACGCCAA GGGCGAAGGC
GGCACGAAGG TCGTCGACGG GGACGGCAAC GAGACCGGTT CCGTTGAGAG CGACGGCAGC
ACCATCAACA TCAACGTGTA CGTCGAGAAT GCCAAGGGCA TCTCTCTTCC CGAGACCGGC
GCGATGACGG CTCTGTACTG CATGGTCGGC GGCATGCTGC TGGTCGTGGC AGGCGCTGCG
TACTACCTGG TGTCCAGGCG CGCGTCGAAG AGCAACCGCT AA
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| Protein sequence | MQMTKKMIAG VVVALTMALC LAATAFAATT QDMSITNAKD GSTYKAFQVM TAEQVGTDND
GKALYAYTVS DDFAGFFKDG ANGYTLDDQN QILKDGKVVA GDDRWTNTNA TDAAALASAL
EKYAVAKGIK GTAVSSAAAA LPEGFYVVAE TVSTEDSTDD SAAKEIATKP ILVNLTGAAA
EITLKDDTTT LEKKIVEGGK LVDTNNVNIG DDVDYQINTK IPTYEANVDT TKLMFKLTDT
FSEGLTYNDD IAIEGFTKDT DYTATLDGQV LTIEFTPAAI AAHQGEAVKA TYSAKLNDKA
KVDSTEGNPN TVKLEYTNNT NEEESHKTLN DETKTFTYGF NVHKVDKVAP STGLADAKFE
LKDKDGNVVK FDYDKATDTY TVNPNGTVTE IVSVGGEGLA TVKGLDEGTY TLTETQAPDE
YTKLSEPVTV TIADKKDANG DNTGVAVLTA GGAGNAKGEG GTKVVDGDGN ETGSVESDGS
TININVYVEN AKGISLPETG AMTALYCMVG GMLLVVAGAA YYLVSRRASK SNR
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