| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_24310 |
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| Symbol | |
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| ID | 8396319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2692189 |
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| End bp | 2693223 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644987177 |
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| Product | sortase family protein, LPXTG-site transpeptidase |
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| Protein accession | YP_003144788 |
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| Protein GI | 257065116 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCATTC TCATAGTGAC GGCAGGAGTC CTGCTGTTCA GCTACCCGGT CCTTGCGTCT
GCCGTGAACG ACTACTTCGC TTTCCGCGAG GTGTCCGAAT ACACGGCAGA CGTGGAAGCC
ATGGACCAAT CCGAGCTGGA TCGCCAGATC GCATTGGCCC AGGCATACAA CCAGGACCTG
CCCCTGAGCT TTCCCGCCGA TCCGTTTTCG GGAAACAACC TGCAAGACTT CGAAGGTACG
GAATTCGAAG ATTTCGAACT GGTTCAACCC GGTGCCATGA TCGGCTATTT GGAAATCCCC
GACATCCATG TGTATCAGTC GATGTACTAC GGAACGTCGG AGGAGGTTCT GAGCAAAGGC
CTGGGTCTGG TGGAAAACAC CTCGCTCCCG GTCGGAGGAC CCGGCACCCA CGCGGTCATT
TCCGGCCACA CAGGCATGGC ATCCCGAGCG TTGTTCACCG ATTTGGACAA GCTCGAGATC
GGGCAGGTCT TCTTCGTGCA TGTGCTCAAC CAGCACTTCG CGTACGAGGT CGACCAGATC
GTCGTCGTGC TGCCGCACGA GACCGAAGAG CTGATGATCC AGAAAGACCA GGACCTGGTC
ACGCTGGTAA CCTGCACGCC CTTCGGCATC AACGACCATC GACTGCTGGT GCGCGGGCAC
CGCATCGACT GGGACTTCTC CGTACAGGAG AAGGGGCTCG GCTCCCTGGC CGGACCCAAC
TGGACGCTGT GGATCTCCAT CCTGAGCGTC GGTGCGATCA TCATCCTGCT GATGATCGCG
AAAGTATGGC GCGACCGGCG GAAGGACGCT GCCGCAAAGG CGGAAGTCGA TTCTGCGGCG
GATCCGGAAG CCCTGGAGGC GTCTGCGAAA ACGGACGATT CGCAAGAGCA GAATCCGCAG
GAAGCCGCCG CTGCTTCTGA GGAACCTCCG AATGAAGAGG TGTTGGAAGA AACGGCGGAT
TCGGAACAGT CCGAGGAACT TGAAGCAACG GAAGGAGGCG AGACGGATGA TTGCGACCAT
GACCAGGATG CGTAG
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| Protein sequence | MAILIVTAGV LLFSYPVLAS AVNDYFAFRE VSEYTADVEA MDQSELDRQI ALAQAYNQDL
PLSFPADPFS GNNLQDFEGT EFEDFELVQP GAMIGYLEIP DIHVYQSMYY GTSEEVLSKG
LGLVENTSLP VGGPGTHAVI SGHTGMASRA LFTDLDKLEI GQVFFVHVLN QHFAYEVDQI
VVVLPHETEE LMIQKDQDLV TLVTCTPFGI NDHRLLVRGH RIDWDFSVQE KGLGSLAGPN
WTLWISILSV GAIIILLMIA KVWRDRRKDA AAKAEVDSAA DPEALEASAK TDDSQEQNPQ
EAAAASEEPP NEEVLEETAD SEQSEELEAT EGGETDDCDH DQDA
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