Gene Shel_24170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24170 
Symbol 
ID8396305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2675165 
End bp2675575 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content61% 
IMG OID644987163 
Producthypothetical protein 
Protein accessionYP_003144774 
Protein GI257065102 
COG category[S] Function unknown 
COG ID[COG5015] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTC AAGAAGAAAT CAGTGCCTAT CTCGGCGAAT GCGGCGTGTT CTATTTCGCG 
ACCGTCGACG GTGACGGCGC ATCGGTTCGC CCGCTGGGGT TCCAGATGGC TCGAAACGGC
CAGCTGTACC TGGGCATCGG CACCCATAAG GATGTGTACA AGCAGCTCGT GGCGAACCCC
AAGATCTCTC TGGCTGCCAC CAAGCCCGAC GGATCGAGCT GGCTGCGTCT GAGCGGTACC
GCCGTCTGCG ACAACGACCC CGCGCTGGTG GATGCGGCCT TCGAGGTCAT GCCGCAGCTG
AAGCCCATGT ACGAGGCCAA CGGCTGGACC ATGGGAATCC TGCATTTCGA GGACGCGACG
GCCACCTTCT ACGAGAACCT GATGGTTCCT GCGCGCGTCG AGACGTTCTA A
 
Protein sequence
MTVQEEISAY LGECGVFYFA TVDGDGASVR PLGFQMARNG QLYLGIGTHK DVYKQLVANP 
KISLAATKPD GSSWLRLSGT AVCDNDPALV DAAFEVMPQL KPMYEANGWT MGILHFEDAT
ATFYENLMVP ARVETF