Gene Shel_24110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24110 
Symbol 
ID8396299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2668383 
End bp2670038 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content61% 
IMG OID644987157 
Producthypothetical protein 
Protein accessionYP_003144768 
Protein GI257065096 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGACC TTAACCGAAC CCTTTTCTAC AAGACGTCTT TCGATATCGA ATCCGTCAAG 
CCAGGCACCG ACGTGCTGTG GCAGCTCATG ATGAGCATCC GTTATTGGAT GGTAGGCAAG
TGGAACCGAG AGGGGGAGGT CGTCCCCGAG TCGAAGCGCC AATGGGGCGC CTTCAAATCC
GGCGCGGTGT TCACCTCCCT TGACGAGGCG AAAACCGTGC GCTTCGAATC CGCCGTGTTC
TGGGACGAAC CCGTCGGTAC CCAGTGGACC TGCGCGATTA CCGAAACGAT CGCCGATCCC
GGCTACGCCC ATCGCCAGTG GACCACCGAA ATCGGTTTCA CGAAGACGGG CGAATGCGCC
GGCACGGTGT CGCTGGTGCT GTCGTACGGC GACCAGCCAG GTTTCTTGGG GCCCCGCCAG
CAGATTCCCG AAGAGTCCAT CCCGCGCATC GTGCGCATTC TGAACGGCAA CATCAACCTT
GCCTGTTCCA TCGACGGGCG GCCCTTGGTT TTCGGGGCGC AGGCGCTGCA CGTGGGGGAT
TTCCCGAAGT TCTGGGAGGT CATCTCGAAT GCCGACCGCA GCGTGCCGGT GATCTACGTA
AGCCCGAGGT TCGTCGACGG GCGGCCCGAA TTCGCCGTCG ATCCGCAGGC TGTGGCGCGT
GTTCTGGGGA CGAGCGCCTT GGTGTATTAC ACCTGCGACC CCGATTTCTG CGAAGAGATG
GAATACGGCA TTCCCAGTCA TGGTCTGCGA TGCAGCAACG GCATGGTGCG GGCGTACACG
CTGCGGCCGA ATTTCGACGA CCCTGAGGAC GCCGTGCGCC ACCGCTTCTT CACCGCGTCC
GACGTGCAGG ACATGGGTGC CGAAGTCCTG TTGGACCTGT TCCGCCAGGT GTACGCCCAG
GATGTGAACT TCTACGAGCA GATGGTGCGC ATCGACGACG TTCGCACCAA GGTGCGCCGC
GCCAGTCTGG AAAAGCGCGC CCAGCGCCGG ATTGAAGCGG TCGAGGAGGA AGCCATCAGC
ATCGCCAGCG ACATCGAGGA AGGCCTGCTG GAGGTCCAGC GCGAAAACGA CCGTCTGACA
AAGGCTCTGG CCGAGGTGGA GAACGAACGC CACCTGCTTG CTGCCAAAAA CGAGATGCTC
GAATATCGTC TGAAGGGCGG CGCGGACGCC GCCGAGGCTC AGCGGGTCGA ACTGAACAGT
TGGCCCATGT CGCCCCGTGA GGTGGCCGAG TTGTTCCTGC GGGTGTATCC CGACCGCATC
GCCTTCACGG GTCGCGGTTT CCGTTCGCTG GACGAATGCT CCACCAATTC CGAAACGGTG
TGGAACGCCC TGTACGACCT GTGCACCATC GCTCACGGCC TGCTTCGCAG CCAGGGCGGC
GTCGATCCGG CACGGGAGTT CAACGACCGA TCCAGGTTCG AATACGCCCG CGGTGCTGGG
ATGATGACCC GCAAGAACGC CAAGCTTATG GAAGACTACG TTGACGAATA CGAAGGCCGC
TCCTTGGAGG CGCAGATGCA TCTCAAAAGC GGCATCAAGG AGTCCGACGA CCGTTTCATG
CGGATGTATT TCGGGTATGA CCAGGTGAGC GGCAAAATCG TCATCTCCCA CGTGGGTAAG
CATCTGGCCA CCTATTCCGC CCGCACCCTG AAGTAG
 
Protein sequence
MHDLNRTLFY KTSFDIESVK PGTDVLWQLM MSIRYWMVGK WNREGEVVPE SKRQWGAFKS 
GAVFTSLDEA KTVRFESAVF WDEPVGTQWT CAITETIADP GYAHRQWTTE IGFTKTGECA
GTVSLVLSYG DQPGFLGPRQ QIPEESIPRI VRILNGNINL ACSIDGRPLV FGAQALHVGD
FPKFWEVISN ADRSVPVIYV SPRFVDGRPE FAVDPQAVAR VLGTSALVYY TCDPDFCEEM
EYGIPSHGLR CSNGMVRAYT LRPNFDDPED AVRHRFFTAS DVQDMGAEVL LDLFRQVYAQ
DVNFYEQMVR IDDVRTKVRR ASLEKRAQRR IEAVEEEAIS IASDIEEGLL EVQRENDRLT
KALAEVENER HLLAAKNEML EYRLKGGADA AEAQRVELNS WPMSPREVAE LFLRVYPDRI
AFTGRGFRSL DECSTNSETV WNALYDLCTI AHGLLRSQGG VDPAREFNDR SRFEYARGAG
MMTRKNAKLM EDYVDEYEGR SLEAQMHLKS GIKESDDRFM RMYFGYDQVS GKIVISHVGK
HLATYSARTL K