Gene Shel_24060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24060 
Symbol 
ID8396294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2664175 
End bp2665011 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content64% 
IMG OID644987152 
ProductABC-type cobalt transport system, ATPase component 
Protein accessionYP_003144763 
Protein GI257065091 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.569983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAC TACGGCTGGA CGACGCCTGG TTCACCTACA CAGGCGATGA ATTCGTGTTG 
AAGGGTATCG ACCTTTCGGT GCAGGAGGGC GAGTTCCTCT GCATCCTGGG CGGCAACGGC
AGCGGCAAAA GCACGCTTGC CAAGCATATC AACGCCCTGC TGGCACCCGA CCGCGGAAGC
GCCCAGGTGC TGGGATGCGA CACCTCCGAT CCCGAAAACC TGTATTTCAT CAGGAGCAAC
GCGGGCATGG TGTTTCAGAA CCCCGACGAC CAGCTGGTAG CCAACCTGAT TGAGAACGAC
GTCGCATTCG GCCCGGAGAA CCTGGGCGTT CCCGCAGCCG AGCTGCGCCA ACGCGTGACC
GAAGCCCTTG AGCAGGTGGG TCTGCAGGGC TTCGAGCGCA AGGAGACCAA CGCCCTTTCC
GGCGGCCAGA AGCAGCGCGT CGCCATTGCC GGCGTGCTGG CCATGCGGCC GAAGATCCTG
GTGTTGGACG AAGCCTCCGC CATGCTCGAC CCCCGCGGCC GCAACGGGCT CATGCGCGTC
TGCCGCGAGC TCAACGACGC GGGCATGACC ATCATCATGA TCACTCACTA TATGGAAGAG
GTCGTCCACG CAGACCGCGT CGTGGTGCTT GACTCCGGCT CCGTCGCCCT TGAGGGCACC
CCCGAAGAAG TGCTGACCCA GGCGCAGGAG CTCGAGCGGC TGTCGCTCGA CGTGCCGTTC
GCCGTCAAGG CGAGCCTGGC ATTGCGTGAG GCGGGCGTGC CCGTGCGCGT GCATGTGGAC
GAAGACGACC TGGTCAGCGA TGTAGAGCGG CTGTTTGCGG AAGGCGGTGC GCAATGA
 
Protein sequence
MEALRLDDAW FTYTGDEFVL KGIDLSVQEG EFLCILGGNG SGKSTLAKHI NALLAPDRGS 
AQVLGCDTSD PENLYFIRSN AGMVFQNPDD QLVANLIEND VAFGPENLGV PAAELRQRVT
EALEQVGLQG FERKETNALS GGQKQRVAIA GVLAMRPKIL VLDEASAMLD PRGRNGLMRV
CRELNDAGMT IIMITHYMEE VVHADRVVVL DSGSVALEGT PEEVLTQAQE LERLSLDVPF
AVKASLALRE AGVPVRVHVD EDDLVSDVER LFAEGGAQ