Gene Shel_24050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24050 
Symbol 
ID8396293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2663602 
End bp2664165 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content62% 
IMG OID644987151 
Productpredicted membrane protein 
Protein accessionYP_003144762 
Protein GI257065090 
COG category[S] Function unknown 
COG ID[COG3601] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCA TGACAAACAC CAACAAGTGG GATACCCGCA CCCTCGTCAC CATGGCGCTG 
CTTGCAGCCA TCGCCATCCT GCTGAGCTTT TTGGAATTCC CCATTTTCGC CGCCGTTCCC
TTCCTGAAGC TGGACGTGTC CTTCACGCCC TGCGCCGTGG CGGGCTTCGC CTACGGACCG
CTGGCAGGCT TCGTCGTCGG AGCCATCACC GCCGTGGCCC ACGGCATGAT TTCCGGCAAC
TGGGTGGGCG CCCTCATGAA CATCGTCATG GTGCTCGCAT TCGTGGTACC CGCTGCCTTC
ATCTACAAGA AGAACCACAC CTTCAAGGGC GCCGTCATCG CGTTGGTCGT GGCCACACTC
GTCCAGTCCA TCGTTTCCGT TCCCGCCAAC GTCCTCATCG ACCCGCTGTA CGGCGTTCCT
GCCGATGTGG TCCTGGGCCT TGCCGGCTGG ATCGCGGCCT TCAACGTGGT CAAGGGCGTC
GCGAACTCCG TTCTGACCAT GGTGGTCTAC AAGAGCATCT CCAACCTCAT CACCCCGCAG
AAAGACCAGG TGAGCGGCCG CTAG
 
Protein sequence
MPTMTNTNKW DTRTLVTMAL LAAIAILLSF LEFPIFAAVP FLKLDVSFTP CAVAGFAYGP 
LAGFVVGAIT AVAHGMISGN WVGALMNIVM VLAFVVPAAF IYKKNHTFKG AVIALVVATL
VQSIVSVPAN VLIDPLYGVP ADVVLGLAGW IAAFNVVKGV ANSVLTMVVY KSISNLITPQ
KDQVSGR