Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_24050 |
Symbol | |
ID | 8396293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2663602 |
End bp | 2664165 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644987151 |
Product | predicted membrane protein |
Protein accession | YP_003144762 |
Protein GI | 257065090 |
COG category | [S] Function unknown |
COG ID | [COG3601] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACCA TGACAAACAC CAACAAGTGG GATACCCGCA CCCTCGTCAC CATGGCGCTG CTTGCAGCCA TCGCCATCCT GCTGAGCTTT TTGGAATTCC CCATTTTCGC CGCCGTTCCC TTCCTGAAGC TGGACGTGTC CTTCACGCCC TGCGCCGTGG CGGGCTTCGC CTACGGACCG CTGGCAGGCT TCGTCGTCGG AGCCATCACC GCCGTGGCCC ACGGCATGAT TTCCGGCAAC TGGGTGGGCG CCCTCATGAA CATCGTCATG GTGCTCGCAT TCGTGGTACC CGCTGCCTTC ATCTACAAGA AGAACCACAC CTTCAAGGGC GCCGTCATCG CGTTGGTCGT GGCCACACTC GTCCAGTCCA TCGTTTCCGT TCCCGCCAAC GTCCTCATCG ACCCGCTGTA CGGCGTTCCT GCCGATGTGG TCCTGGGCCT TGCCGGCTGG ATCGCGGCCT TCAACGTGGT CAAGGGCGTC GCGAACTCCG TTCTGACCAT GGTGGTCTAC AAGAGCATCT CCAACCTCAT CACCCCGCAG AAAGACCAGG TGAGCGGCCG CTAG
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Protein sequence | MPTMTNTNKW DTRTLVTMAL LAAIAILLSF LEFPIFAAVP FLKLDVSFTP CAVAGFAYGP LAGFVVGAIT AVAHGMISGN WVGALMNIVM VLAFVVPAAF IYKKNHTFKG AVIALVVATL VQSIVSVPAN VLIDPLYGVP ADVVLGLAGW IAAFNVVKGV ANSVLTMVVY KSISNLITPQ KDQVSGR
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