| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_24030 |
|---|
| Symbol | |
|---|
| ID | 8396292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 2662138 |
|---|
| End bp | 2663145 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644987150 |
|---|
| Product | asparagine synthetase AsnA |
|---|
| Protein accession | YP_003144761 |
|---|
| Protein GI | 257065089 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2502] Asparagine synthetase A |
|---|
| TIGRFAM ID | [TIGR00669] aspartate--ammonia ligase, AsnA-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.528692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGA TCCTACCAGA GGGGTACGAC CCCAAAATGT CCGCCCGCGA GACGGAAGAA
GCCATCAAAT ACATCCGCGA CACGTTCCAG CGTGAATACG GTCGCGAAAT GCGCCTTTCG
CGCGTGTCTG CGCCGCTGTA CGTATTCCAG AACACCGGCT TGAACGACAA CCTCAACGGC
GTGGAGCGCC CCGTAAGCTT CGACGTGCCC TGGGCCCCCG ACGAGCCGGT GGAAGTCGTG
CAGTCTCTGG CCAAGTGGAA GCGCATGGCT CTCAAGAAGT ACGGCTACCT GCCCCACGAA
GGCATCTACA CCAACATGAA CGCCATCCGC CGCGACGAGG AGCTGGACAA CCTGCACTCC
ATCTACGTGG ACCAATGGGA CTGGGAACGC GTCATCTCCA AGGAGGAGCG CACCGAGGAA
ACGCTGCGCC AGGCCGCCAA GGACATCTTC CGCATCATCA AGCACATGGA GCATGAGGTC
TGGTACAAGT ACCCCCATGC CGTCCACCAT CTGCCCGACG AGATCCACTT CATCTCCTCC
GAAGAGCTCC TGCAGATGTA TCCCGACATG ACCCCCGGGC AGCGCGAAGA CGCCATCTGC
AAGAAGCTGG GCTGCGTGTT CGTCATGGGC ATCGGCGACA CGCTCTCCAA CGGCGAAAAG
CATGACGGCC GCGCCCCCGA CTACGACGAC TGGCACCTCA ACGGCGACAT CCTCATGTGG
TACGAACCGC TGGGCCGCTC GCTGGAAATC TCCAGCATGG GCATCCGCGT CGACGAGGAT
TCGCTGCTCG AACAGCTCAA GAAGGCCGGC TGCGAGGAGC GTGCGAACAT GCCGTTCCAC
CGCATGATCC TGGAGAAGGA GCTCCCCTAC ACCATGGGCG GCGGCATCGG CCAGTCGCGT
CTGTGCATGC TGCTGTTGGG CCGCGTGCAC GTGGGCGAGG TCCAGGCCAG CATCTGGCCC
CAGGACATGA TCGACGCGTG CGAAAGCCAC AACATCCATC TGCTGTAA
|
|---|
| Protein sequence | MTLILPEGYD PKMSARETEE AIKYIRDTFQ REYGREMRLS RVSAPLYVFQ NTGLNDNLNG
VERPVSFDVP WAPDEPVEVV QSLAKWKRMA LKKYGYLPHE GIYTNMNAIR RDEELDNLHS
IYVDQWDWER VISKEERTEE TLRQAAKDIF RIIKHMEHEV WYKYPHAVHH LPDEIHFISS
EELLQMYPDM TPGQREDAIC KKLGCVFVMG IGDTLSNGEK HDGRAPDYDD WHLNGDILMW
YEPLGRSLEI SSMGIRVDED SLLEQLKKAG CEERANMPFH RMILEKELPY TMGGGIGQSR
LCMLLLGRVH VGEVQASIWP QDMIDACESH NIHLL
|
|---|
| |