Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_24020 |
Symbol | |
ID | 8396291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2660794 |
End bp | 2661912 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644987149 |
Product | hypothetical protein |
Protein accession | YP_003144760 |
Protein GI | 257065088 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGGAA AAAGGGACAA CGCAACCATC GAGCGCTTCG CCGTAGCGGC GGTGCTGGCG GCCGCATGCC TTGCGATTCG CTTTGCCGCC GGGCGCTTTC CTGAATTGTT CTTTCCCGCC TACCGTGGTT TTTCGAAAGG GCTGATGGGG ATCCTTTCGA CGGTCACAGG CGTGGCCCCC GTCGCCTTGT GGGACTTCCT GGTCGTGGCG CTGGCGGCGG TGGCTTTTGC TGCGTTGGCG CTGCGTGTGC GGGGCGGGAA GCGAATCATG CCTTGGATTT CAGCGGTCGC CCTTGCGGTT TCGGTTGCGG CGACGCTGTT CGTGGGCGGA TGGGCGCTCA ACCACTACGC GCCGCCCCTG TCCGACGAGC TGGGGCTTAA GACTCACGAA AGCTCTGCCG AGCAGTTGGC CGAGGCAACG CGGTATTACC TTAACCAGGC GGCGCAGCTA GCGCCCCAGG TGCCGCGGAC TGGAGAAGGA CACCTTGCCG ACCAGGACTT TTACGAGCTC GGAGCCATCG CCGGTGCGGC GTACGGCCCG CTGGAGGGCC GCTACGACGT GTTTTCGGAC GGGTCCCATG CTCCGGTGAA GGCGCTGCTG CTGTGGGGCG AGCCGCATCT CTATTTAGGA TACGTGGGCA TATTTATGCC CGTCACGGGT GAATCAAGCG TTGCCTACAA CTGCGCGAAC GCGGACCGTC CCTTCACCAT GTGCCACGAG GCGGCCCATC GGCTGGGCAT CGCCAGCGAA GAAGAGGCCA ACTTCGCCGC GTTTCTGGCC TGCGATGCCA GCGACGACGT ACGCTTCAGA TACTCAGGCT ATTACAACGC TTTCTCATAT TGTTACAGCG CGCTGTACCG GGCCGACCCC GAGCTTGCGG GCCAGCTGTT GGAGGACGCG ATGGATGGCG AAAACGCCCT GGGCGTGGCG TTGGTGCTGA CCGATTCGTC GGACACGCGT GCCCATTACG ACGCCTATGA GGGGTCGCTG GAGGATGTGG GCGACGCCGT CAACAACACG TACCTGCGGG GCTTTGGTGA AGAAGCCGGC GTGCAGTCCT ACGGCATCGT CGTGGACTAT CTGATTGCAT GGTATGAACA GGACGCTTCT CAAGCGTGA
|
Protein sequence | MDGKRDNATI ERFAVAAVLA AACLAIRFAA GRFPELFFPA YRGFSKGLMG ILSTVTGVAP VALWDFLVVA LAAVAFAALA LRVRGGKRIM PWISAVALAV SVAATLFVGG WALNHYAPPL SDELGLKTHE SSAEQLAEAT RYYLNQAAQL APQVPRTGEG HLADQDFYEL GAIAGAAYGP LEGRYDVFSD GSHAPVKALL LWGEPHLYLG YVGIFMPVTG ESSVAYNCAN ADRPFTMCHE AAHRLGIASE EEANFAAFLA CDASDDVRFR YSGYYNAFSY CYSALYRADP ELAGQLLEDA MDGENALGVA LVLTDSSDTR AHYDAYEGSL EDVGDAVNNT YLRGFGEEAG VQSYGIVVDY LIAWYEQDAS QA
|
| |