Gene Shel_24020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24020 
Symbol 
ID8396291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2660794 
End bp2661912 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content63% 
IMG OID644987149 
Producthypothetical protein 
Protein accessionYP_003144760 
Protein GI257065088 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGAA AAAGGGACAA CGCAACCATC GAGCGCTTCG CCGTAGCGGC GGTGCTGGCG 
GCCGCATGCC TTGCGATTCG CTTTGCCGCC GGGCGCTTTC CTGAATTGTT CTTTCCCGCC
TACCGTGGTT TTTCGAAAGG GCTGATGGGG ATCCTTTCGA CGGTCACAGG CGTGGCCCCC
GTCGCCTTGT GGGACTTCCT GGTCGTGGCG CTGGCGGCGG TGGCTTTTGC TGCGTTGGCG
CTGCGTGTGC GGGGCGGGAA GCGAATCATG CCTTGGATTT CAGCGGTCGC CCTTGCGGTT
TCGGTTGCGG CGACGCTGTT CGTGGGCGGA TGGGCGCTCA ACCACTACGC GCCGCCCCTG
TCCGACGAGC TGGGGCTTAA GACTCACGAA AGCTCTGCCG AGCAGTTGGC CGAGGCAACG
CGGTATTACC TTAACCAGGC GGCGCAGCTA GCGCCCCAGG TGCCGCGGAC TGGAGAAGGA
CACCTTGCCG ACCAGGACTT TTACGAGCTC GGAGCCATCG CCGGTGCGGC GTACGGCCCG
CTGGAGGGCC GCTACGACGT GTTTTCGGAC GGGTCCCATG CTCCGGTGAA GGCGCTGCTG
CTGTGGGGCG AGCCGCATCT CTATTTAGGA TACGTGGGCA TATTTATGCC CGTCACGGGT
GAATCAAGCG TTGCCTACAA CTGCGCGAAC GCGGACCGTC CCTTCACCAT GTGCCACGAG
GCGGCCCATC GGCTGGGCAT CGCCAGCGAA GAAGAGGCCA ACTTCGCCGC GTTTCTGGCC
TGCGATGCCA GCGACGACGT ACGCTTCAGA TACTCAGGCT ATTACAACGC TTTCTCATAT
TGTTACAGCG CGCTGTACCG GGCCGACCCC GAGCTTGCGG GCCAGCTGTT GGAGGACGCG
ATGGATGGCG AAAACGCCCT GGGCGTGGCG TTGGTGCTGA CCGATTCGTC GGACACGCGT
GCCCATTACG ACGCCTATGA GGGGTCGCTG GAGGATGTGG GCGACGCCGT CAACAACACG
TACCTGCGGG GCTTTGGTGA AGAAGCCGGC GTGCAGTCCT ACGGCATCGT CGTGGACTAT
CTGATTGCAT GGTATGAACA GGACGCTTCT CAAGCGTGA
 
Protein sequence
MDGKRDNATI ERFAVAAVLA AACLAIRFAA GRFPELFFPA YRGFSKGLMG ILSTVTGVAP 
VALWDFLVVA LAAVAFAALA LRVRGGKRIM PWISAVALAV SVAATLFVGG WALNHYAPPL
SDELGLKTHE SSAEQLAEAT RYYLNQAAQL APQVPRTGEG HLADQDFYEL GAIAGAAYGP
LEGRYDVFSD GSHAPVKALL LWGEPHLYLG YVGIFMPVTG ESSVAYNCAN ADRPFTMCHE
AAHRLGIASE EEANFAAFLA CDASDDVRFR YSGYYNAFSY CYSALYRADP ELAGQLLEDA
MDGENALGVA LVLTDSSDTR AHYDAYEGSL EDVGDAVNNT YLRGFGEEAG VQSYGIVVDY
LIAWYEQDAS QA